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Job DescriptionP43403
Confidence100.00%DateThu Apr 26 09:45:10 BST 2012
Rank63Aligned Residues249
% Identity27%Templatec2bmcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:serine threonine-protein kinase 6; PDBTitle: aurora-2 t287d t288d complexed with pha-680632
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT. . EKADTEEMMREAQIMHQLDNPYIVRLIGVC. QAEALML
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Template Sequence  EDFEIGRPLGKGKFGNVYLAREKQSKF. . ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL
Template Known Secondary structure  GG
SSTTT

..TT
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TTB


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   131........140.........150....... ..160.........170.........180.........190.........200........
 
   413......420.........430.........440.........450.........460.........470.........480.........490..
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Query Sequence  VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY
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Template Sequence  ILEYAPLGTVYRELQKLSK. FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS. . . . . . . . .
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TT
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S

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   209210.........220....... ..230.........240.........250.........260.........270........
 
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Query Sequence  YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALM
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Template Sequence  . . . . . . . . VTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV. GKPPFEANTYQETYKRISRVE. FTFPDFVTEGARDLI
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GGG

GGGTTTTSSGGG.SS
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   279280.........290.........300.........310.. .......320.........330... ......340........
 
   573......580.........590.........600.........610..
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Query Sequence  SDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGPPGSTQ
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Template Sequence  SRLLKHNPSQRPMLREV. . . LEHPWIT. . . ANSSKPSNCQ
Template Known Secondary structure  S
SSGGGS

...T
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   361........370....... ..380.... .....390....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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