Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 93 Aligned Residues 211 % Identity 26% Template c2b3oA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase, non-receptor type PDBTitle: crystal structure of human tyrosine phosphatase shp-1 Resolution 2.80 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	F	F	Y	G	S	I	S	R	A	E	A	E	E	H	L	K	L	A	G	M	A	D	G	L	F	L	L	R	Q	C	L	R	S	L	G	G	Y	V	L	S	L	V	H	D	V	R	F	H	H	F	P	I	E	R	Q	L	N	G	T	Y	A	I	A	G	G	K	A	H	C	G	P	A	E	L	C	E	F	Y
Query Conservation
Alig confidence																								.																																			.
Template Conservation																								.																																			.
Template Sequence		V	R	W	F	H	R	D	L	S	G	L	D	A	E	T	L	L	K	G	R	G	V	.	H	G	S	F	L	A	R	P	S	R	K	N	Q	G	D	F	S	L	S	V	R	V	G	D	Q	V	T	H	I	R	I	Q	N	S	.	G	D	F	Y	D	L	Y	G	G	E	K	F	A	T	L	T	E	L	V	E	Y	Y
Template Known Secondary structure			T	T	B		S	S																.	T	T								S	S	S	S	S									T	T										S	.	S	S					T	T	S				S
Template Predicted Secondary structure																								.																																			.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	D	P	D	G	L	P	C	N	L	R	K	P	C	N	R	P	S	G	L	E	P	Q	P	G	V	F	D	C	L	R	D	A	M	V	R	D	Y	V	R	Q	T	W	K	L	E	G	E	A	L	E	Q	A	I	I	S	Q	A	P	Q	V	E	K	L	I	A	T	T	A	H	E	R	M	P	W	Y	H	S	S
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Q	Q	Q	G	V	L	Q	D	R	D	G	T	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	K	Y	P	L	N	C	S	D	P	T	S	E	R	W	Y	H	G	H
Template Known Secondary structure			T	T		S		B			S	S	S			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											G	G	G		T	T	B		T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																																														.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																											.															.	.	.	.	.
Query SS confidence																											.															.	.	.	.	.
Query Sequence		L	T	R	E	E	A	E	R	K	L	Y	S	G	A	Q	T	D	G	K	F	L	L	R	P	R	.	K	E	Q	G	T	Y	A	L	S	L	I	Y	G	K	.	.	.	.	.	T	V	Y	H	Y	L	I	S	Q	D	K	A	G	K	Y	C	I	P	E	G	T	K	F	D	T	L	W	Q	L	V	E	Y	L	K	L
Query Conservation																											.															.	.	.	.	.
Alig confidence																.											.															.	.	.	.	.								.
Template Conservation																.																																						.
Template Sequence		M	S	G	G	Q	A	E	T	L	L	Q	A	K	G	.	E	P	W	T	F	L	V	R	E	S	L	S	Q	P	G	D	F	V	L	S	V	L	S	D	Q	P	K	S	P	L	R	V	T	H	I	K	V	.	M	C	E	G	G	R	Y	T	V	G	G	L	E	T	F	D	S	L	T	D	L	V	E	H	F	K	K
Template Known Secondary structure																.		T	T								S	S	S	T	T																							.	B			T	T	S	B	B	S	S	S	S			B	S	S
Template Predicted Secondary structure																.																																						.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		242	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		K	A	.	.	.	.	D	G	L	I	Y	C	L	K	E	A	C	P	N	S	S	A	S	N	A	S	G	A	A	A
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		T	G	I	E	E	A	S	G	A	F	V	Y	L	R	Q	P	Y	Y	A	T	R	V	N	A	A	D	I	E	N	R
Template Known Secondary structure							S	S	S																	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions