Job Description P43403 Confidence 100.00% Date Thu Apr 26 09:45:10 BST 2012 Rank 226 Aligned Residues 244 % Identity 21% Template c2ac5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g Resolution 3.20 Å

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		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410
Predicted Secondary structure																																																															.													.
Query SS confidence																																																															.													.
Query Sequence		K	R	D	N	L	L	I	A	D	I	E	L	G	C	G	N	F	G	S	V	R	Q	G	V	Y	R	M	R	K	K	Q	I	D	V	A	I	K	V	L	K	Q	G	T	E	K	A	D	T	E	E	M	M	R	E	A	Q	I	M	H	Q	L	.	D	N	P	Y	I	V	R	L	I	G	V	C	.	Q	A	E	A	L
Query Conservation																																																															.													.
Alig confidence																																.	.															.															.													.
Template Conservation																																.	.															.
Template Sequence		F	E	D	V	Y	Q	L	Q	E	D	V	L	G	E	G	A	H	A	R	V	Q	T	C	I	N	L	I	T	S	Q	.	.	E	Y	A	V	K	I	I	E	K	Q	P	G	H	I	.	R	S	R	V	F	R	E	V	E	M	L	Y	Q	C	Q	G	H	R	N	V	L	E	L	I	E	F	F	E	E	E	D	R	F
Template Known Secondary structure		G	G	G	S							S					S	S									S	S	S			.	.											S	S			.														T				T	T	B										S	S
Template Predicted Secondary structure																																.	.															.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	V	M	E	M	A	G	G	G	P	L	H	K	F	L	V	G	K	R	E	E	I	P	V	S	N	V	A	E	L	L	H	Q	V	S	M	G	M	K	Y	L	E	E	K	N	F	V	H	R	D	L	A	A	R	N	V	L	L	V	N	R	H	Y	A	K	I	S	D	F	G	L	S	K	A	L	G	A	D	D
Query Conservation
Alig confidence																							.																																																					.	.	.	.	.	.
Template Conservation																							.																																																					.	.	.	.	.	.
Template Sequence		Y	L	V	F	E	K	M	R	G	G	S	I	L	S	H	I	H	K	R	R	H	.	F	N	E	L	E	A	S	V	V	V	Q	D	V	A	S	A	L	D	F	L	H	N	K	G	I	A	H	R	D	L	K	P	E	N	I	L	C	E	H	P	N	Q	V	S	P	V	K	I	C	D	F	G	.	.	.	.	.	.
Template Known Secondary structure									T	T		B									S		.																						T	T	T				S				G	G	G						T	T							B					.	.	.	.	.	.
Template Predicted Secondary structure																							.																																																					.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.												.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	Y	T	A	R	S	A	G	K	W	P	L	K	W	Y	A	P	E	C	I	N	F	R	K	F	S	S	R	S	D	V	W	S	Y	G	V	T	M	W	E	A	L	S	Y	G	Q	K	P	Y	K	K	M	K	.	.	.	.	.	.	.	.	.	.	.	G	P	E	V	M	A	F	I	E	Q	G	K	R	M	E
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																																										.										.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation		.	.	.																																										.																																	.
Template Sequence		.	.	.	P	C	G	S	A	E	Y	M	A	P	E	V	V	E	A	F	S	E	E	A	S	I	Y	D	K	R	C	D	L	W	S	L	G	V	I	L	Y	I	L	L	S	.	G	Y	P	P	F	V	G	R	C	G	S	D	C	G	W	A	C	P	A	C	Q	N	M	L	F	E	S	I	Q	E	G	K	.	Y	E
Template Known Secondary structure		.	.	.			S	S	G	G	G								S	S	S					T	T	T	T																	.	S	S		S	S					S	S																			T	T		.
Template Predicted Secondary structure		.	.	.																																										.																																	.
Template SS confidence
					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.		.	.
		560	.	.	.					.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		C	P	P	E	.	.	.	.	C	P	P	E	L	Y	A	L	M	S	D	C	W	I	Y	K	W	E	D	R	P	D	F	L	T	V	E	Q
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		F	P	D	K	D	W	A	H	I	S	C	A	A	K	D	L	I	S	K	L	L	V	R	D	A	K	Q	R	L	S	A	A	Q	V	L	Q
Template Known Secondary structure								T	T	S												S		S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions