Job Description Q6XZF7 Confidence 51.52% Date Thu Apr 26 09:30:42 BST 2012 Rank 295 Aligned Residues 82 % Identity 12% Template d1wi5a_ SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution UNK

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		22	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure											.															.	.									.	.	.	.	.																														.
Query SS confidence											.															.	.									.	.	.	.	.																														.
Query Sequence		P	L	F	V	G	D	I	I	E	.	V	L	A	V	V	D	E	F	W	L	L	G	K	K	.	.	E	D	V	T	G	Q	F	P	.	.	.	.	.	S	S	F	V	E	I	V	T	I	P	S	L	K	E	G	E	R	L	F	V	C	I	C	E	F	T	S	Q	E	.	L	D	N	L	P	L	H	R	G	D	L
Query Conservation											.															.	.									.	.	.	.	.																														.
Alig confidence											.															.	.									.	.	.	.	.																														.
Template Conservation
Template Sequence		A	L	K	P	G	M	L	L	T	G	T	V	S	S	L	E	D	H	G	Y	L	V	D	I	G	V	D	G	T	R	A	F	L	P	L	L	K	A	Q	E	Y	I	R	Q	K	N	K	G	A	K	L	K	V	G	Q	Y	L	N	C	I	V	E	K	V	K	G	N	G	G	V	V	S	L	S	V	G	H	S	E	V
Template Known Secondary structure		T			T	T												S	S									S	S																		S	S	S					T	T												T	T	S												S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	D	G	I	P	T	A	G	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	T	A	I	A	T	E	Q	Q	S	W
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions