Return to main results Retrieve Phyre Job Id

Job DescriptionQ6XZF7
Confidence25.94%DateThu Apr 26 09:30:42 BST 2012
Rank345Aligned Residues68
% Identity16%Templated1sroa_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30 .........40.... .....50.........60... ......70.........80.........90
Predicted Secondary structure 




.



.










....















Query SS confidence 







.













.


















. . . .


























Query Sequence  LFVGDIIE. VLAVVDEFWLLGKK. EDVTGQFPSSFVEIVTIPS. . . . LKEGERLFVCICEFTSQELDNLPLHRG
Query Conservation 
  

 
 .
    
  
  
  .    
  
   
       ....            
        
    
Alig confidence 







.













.


















....


























Template Conservation 
  
  
 
 
  
   
  
 
     
 
    

          
 

  
   

 

   

 



 
Template Sequence  IEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEA
Template Known Secondary structure 

TTSTT
SSS


B

TTSS
SS

S


TT


TT





Template Predicted Secondary structure 





























Template SS confidence 









































































   3......10.........20.........30.........40.........50.........60.........70......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions