Job Description Q6XZF7 Confidence 99.54% Date Thu Apr 26 09:30:42 BST 2012 Rank 56 Aligned Residues 191 % Identity 24% Template c3sogA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:amphiphysin; PDBTitle: crystal structure of the bar domain of human amphiphysin, isoform 1 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	V	F	E	E	T	E	K	N	F	R	M	Q	E	R	L	I	K	S	F	I	R	D	L	S	L	Y	L	Q	H	I	R	E	S	A	C	V	K	V	V	A	A	V	S	M	W	D	V	C	M	E	R	G	H	R	D	L	E	Q	F	E	R	V	H	R	Y	I	S	D	Q	L	F	T	N	F	K	E	R	T
Query Conservation
Alig confidence																																																				.	.
Template Conservation																																																				.	.
Template Sequence		D	E	Q	F	E	E	Y	V	Q	N	F	K	R	Q	E	A	E	G	T	R	L	Q	R	E	L	R	G	Y	L	A	A	I	K	G	M	Q	E	A	S	M	K	L	T	E	S	L	H	E	V	Y	.	.	E	P	D	W	Y	G	R	E	D	V	K	M	V	G	E	K	C	D	V	L	W	E	D	F	H	Q	K	L
Template Known Secondary structure																																																		T	T	.	.		S			S		S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.							.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.
Query Sequence		E	R	L	V	I	S	P	L	N	Q	L	L	S	M	F	T	G	P	H	K	L	V	Q	K	R	F	D	K	L	L	D	F	Y	N	C	T	E	R	A	E	K	L	K	D	K	.	.	.	.	.	.	K	T	L	E	E	L	Q	S	A	R	N	N	Y	E	A	L	N	A	Q	L	L	D	E	L	P	K	F	H	Q
Query Conservation																																															.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	G	S	L	L	T	L	D	T	Y	L	G	Q	F	P	D	I	K	N	R	I	A	K	R	S	R	K	L	V	D	Y	D	S	A	R	H	H	L	E	A	L	Q	S	K	D	E	S	R	I	S	K	A	E	E	E	F	Q	K	A	Q	K	V	F	E	E	F	N	V	D	L	Q	E	E	L	P	S	L	W	S
Template Known Secondary structure				T										T	T																								G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		1174	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	Q	G	L	F	T	N	C	V	H	G	Y	A	E	A	H	C	D	F	V	H	Q	A	L	E	Q	L	K	P	L	L	S	L	L	K	V	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	V	G	F	Y	V	N	T	F	K	N	V	S	S	L	E	A	K	F	H	K	E	I	A	V	L	C	H	K	L	Y	E	V	M	T	K	L	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions