Job Description Q6XZF7 Confidence 29.10% Date Thu Apr 26 09:30:42 BST 2012 Rank 336 Aligned Residues 47 % Identity 17% Template c3njqB_ PDB info PDB header:viral protein/inhibitor Chain: B: PDB Molecule:orf 17; PDBTitle: crystal structure of kaposi's sarcoma-associated herpesvirus protease2 in complex with dimer disruptor Resolution 2.00 Å

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		1518	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.										.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.
Query Sequence		Y	F	A	V	Y	T	F	K	A	R	N	P	N	E	L	S	V	S	A	N	.	.	.	.	.	.	.	.	.	Q	K	L	K	I	L	E	F	K	D	V	T	G	N	T	E	W	W	L	A	E	V	N	G	K	K	G	Y	V
Query Conservation																						.	.	.	.	.	.	.	.	.
Alig confidence								.	.													.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		F	V	D	V	V	S	.	.	P	K	L	E	Q	E	L	Y	L	D	P	D	Q	V	T	D	Y	L	P	V	T	E	P	L	P	I	T	I	E	H	L	P	E	T	E	V	G	W	T	L	G	L	F	Q	V	S	H	G	I	F
Template Known Secondary structure								.	.			S	S	S						G	G	G	T	G	G	G			B		S							T	T	B	T	T	B												T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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