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Job DescriptionQ6XZF7
Confidence20.85%DateThu Apr 26 09:30:42 BST 2012
Rank402Aligned Residues199
% Identity15%Templatec3m3wA_
PDB info PDB header:endocytosisChain: A: PDB Molecule:protein kinase c and casein kinase ii substrate protein 3; PDBTitle: crystal strcuture of mouse pacsin3 bar domain mutant
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   780.........790.........800.........810........ .820.........830.........840........
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Query Sequence  RMLEKRAKVIEELLQTERDYIRDLEMCIERIMVPMQQAQ. . . VPNIDFEGLFGNMQMVIKVSKQLLAALEIS. . . . . . . .
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Template Sequence  RLCGDLVSCFQERARIEKAYAQQLADWARKWRGAVEKGPQYGTLEKAWHAFFTAAERLSELHLEVREKLHGPDSERVRTW
Template Known Secondary structure  SS

T
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   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   849850.........860.........870.........880..... ...
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Query Sequence  . . . . . . . . . . . . . . . . . . DAVGPVFLGHRDELEGTYKIYCQNHDEAIALLEIYEK. . . . . . . . . . . . . . . . . . . . . . DEK
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Template Sequence  QRGAFHGFRASRAAEDGFRKAQKPWLKRLKEVEASKKSYHTARKDEKTAQTRESHAKADSSMQLRKLQERVGRCTKEAEK
Template Known Secondary structure  T


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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   889890.........900.........910.........920.........930.........940.........950.........960........
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Query Sequence  IQKHLQDSLADLKSLYNEWGCTNYINLGSFLIKPVQRVMRYPLLLMELLNSTPESHPDKVPLTNAVLAVKEINVNINEYK
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Template Sequence  MKTQYEQTLAELNRYTPRYMEDMEQAFESCQAAERQRLLFFKDVLLTLHQHL. . DLSSSDKFHELHRDLQQSIEAASDEE
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GGG


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   202.......210.........220.........230.........240.........250... ......260.........270.........
 
   969970.........980
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Query Sequence  RRKDLVLKYRKG
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Template Sequence  DLRWWRSTHGPG
Template Known Secondary structure  STT
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   280.........290.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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