Job Description Q6XZF7 Confidence 99.95% Date Thu Apr 26 09:30:42 BST 2012 Rank 3 Aligned Residues 193 % Identity 25% Template c3ky9B_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:proto-oncogene vav; PDBTitle: autoinhibited vav1 Resolution 2.73 Å

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		780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.							.	850	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.
Query Sequence		R	M	L	E	K	R	A	K	V	I	E	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	I	M	V	P	M	Q	Q	A	Q	V	P	N	I	D	F	E	G	L	F	G	N	M	Q	M	V	I	K	V	S	K	Q	L	L	A	A	L	E	I	S	.	.	.	.	.	.	D	A	V	G	P
Query Conservation																																																																							.	.	.	.	.	.
Alig confidence																																							.																																.	.	.	.	.	.
Template Conservation																																							.
Template Sequence		T	E	Y	D	K	R	C	C	C	L	R	E	I	Q	Q	T	E	E	K	Y	T	D	T	L	G	S	I	Q	Q	H	F	L	K	P	L	Q	R	.	F	L	K	P	Q	D	I	E	I	I	F	I	N	I	E	D	L	L	R	V	H	T	H	F	L	K	E	M	K	E	A	L	G	T	P	G	A	A	N	L	Y	Q
Template Known Secondary structure			T	T																												T						T	.	T	S		T	T	T	S																											S	S	T	T		S
Template Predicted Secondary structure																																							.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		854	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.		.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		V	F	L	G	H	R	D	E	L	E	G	T	Y	K	I	Y	C	Q	N	H	D	E	A	I	A	L	L	E	I	Y	E	K	.	D	E	K	I	Q	K	H	L	Q	D	S	L	A	D	L	K	S	L	Y	N	E	W	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	V	M	R	Y	P	L	L
Query Conservation																																		.
Alig confidence												.																						.																		.	.	.	.	.	.	.	.
Template Conservation												.																																								.	.	.	.	.	.	.	.
Template Sequence		V	F	I	K	Y	K	E	R	F	L	.	V	Y	G	R	Y	C	S	Q	V	E	S	A	S	K	H	L	D	R	V	A	A	A	R	E	D	V	Q	M	K	L	E	E	C	S	Q	R	A	N	N	.	.	.	.	.	.	.	.	G	R	F	T	L	R	D	L	L	M	V	P	M	Q	R	V	L	K	Y	H	L	L
Template Known Secondary structure						T	T	G	G	G	G	.																						T						T	T	T	T								T	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure												.																																								.	.	.	.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.									.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		933	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	E	L	L	N	S	T	P	E	S	H	P	D	K	V	P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D	L	V	L	K	Y	R	K	G	D	E	D
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		L	Q	E	L	V	K	H	T	Q	.	E	A	M	E	K	E	N	L	R	L	A	L	D	A	M	R	D	L	A	Q	C	V	N	E	V	K	R	D	N	E	T	L	R	Q	I	T	N	F	Q	L	S
Template Known Secondary structure								T			.
Template Predicted Secondary structure											.
Template SS confidence
		340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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