Job Description Q6XZF7 Confidence 36.40% Date Thu Apr 26 09:30:42 BST 2012 Rank 318 Aligned Residues 118 % Identity 13% Template c3go5A_ PDB info
PDB header: gene regulationChain: A: PDB Molecule: multidomain protein with s1 rna-binding domains;
PDBTitle: crystal structure of a multidomain protein with nucleic acid binding2 domains (sp_0946) from streptococcus pneumoniae tigr4 at 1.40 a3 resolution
Resolution 1.40 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70
Predicted Secondary structure
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Query SS confidence
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Query Sequence
M E A G S V V R A I F D F C P S V S E E L P .
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L F V G D I I E .
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V L A V V D E F W L L G K K E .
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D V T G Q F P S S F V E I V T I P S L K E G E R L
Query Conservation
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Alig confidence
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Template Conservation
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Template Sequence
H T V G D T V K G .
F A Y T D X K Q K L R L T T L E V T A T Q D Q F G W G R V T E V R K D L G V F V D T G L P D K E I V V S L D I L P E L K E L W P K K G D Q L
Template Known Secondary structure
T T S . T T S S S S S S T T T S T T G G G S S S G G G S T T
Template Predicted Secondary structure
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Template SS confidence
39 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . .
71 . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . .
Predicted Secondary structure
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Query SS confidence
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Query Sequence
F V C I C .
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E F T S Q E L D N L P L H R G D L V .
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I L D G I P T A G W L Q G R S C W G A R G F F P S S
Query Conservation
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Alig confidence
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Template Conservation
Template Sequence
Y I R L E V D K K D R I W G L L A Y Q E D F Q R L A R P A Y N N X Q N Q N W P A I V Y R L K L S G T F V Y L P E N N X L G F I H P S
Template Known Secondary structure
T T S S T T T T T T T T G G
Template Predicted Secondary structure
Template SS confidence
118 . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
