Job Description Q6XZF7 Confidence 99.83% Date Thu Apr 26 09:30:42 BST 2012 Rank 39 Aligned Residues 178 % Identity 29% Template c3gf9A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:intersectin 2; PDBTitle: crystal structure of human intersectin 2 rhogef domain Resolution 2.50 Å

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		781	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.		.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.			.	850	.	.	.	.	.	.	.
Predicted Secondary structure																																								.																															.	.
Query SS confidence																																								.																															.	.
Query Sequence		M	L	E	K	R	A	K	V	I	E	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	I	M	V	P	M	Q	Q	A	Q	.	V	P	N	I	D	F	E	G	L	F	G	N	M	Q	M	V	I	K	V	S	K	Q	L	L	A	A	L	E	I	S	.	.	D	A	V	G	P	V	F	L	G
Query Conservation																																								.																															.	.
Alig confidence																																								.																															.	.
Template Conservation
Template Sequence		I	E	R	K	R	Q	G	Y	I	H	E	L	I	Q	T	E	E	R	Y	M	A	D	L	Q	L	V	V	E	V	F	Q	K	R	M	A	E	S	G	F	L	T	E	G	E	M	A	L	I	F	V	N	W	K	E	L	I	M	S	N	T	K	L	L	K	A	L	R	V	R	K	V	Q	M	I	G	D	I	L	A	A
Template Known Secondary structure																															T								S	S	S										T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		1178	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.
		858	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	D	E	L	E	G	T	Y	K	I	Y	C	Q	N	H	D	E	A	I	A	L	L	E	I	Y	E	K	D	E	K	I	Q	K	H	L	Q	D	S	L	A	D	L	K	S	L	Y	N	E	W	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	V	M	R	Y	P	L	L	L	M	E	L	L
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.
Template Sequence		E	L	S	H	M	Q	A	Y	I	R	F	C	S	C	Q	L	N	G	A	A	L	L	Q	Q	K	T	D	E	D	T	D	F	K	E	F	L	K	K	L	A	S	D	P	R	C	.	.	.	.	.	.	.	.	K	G	M	P	L	S	S	F	L	L	K	P	M	Q	R	I	T	R	Y	P	L	L	I	R	S	I	L
Template Known Secondary structure			T	T	S																																					T	S	T	T	T	.	.	.	.	.	.	.	.	T	T							T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Template SS confidence
		1266	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310									.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.
		938	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	T	P	E	S	H	P	D	K	V	P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	T	P	E	S	H	A	D	H	S	S	L	K	L	A	L	E	R	A	E	E	L	C	S	Q	V	N	E
Template Known Secondary structure			T	S		T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1338	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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