Job Description Q6XZF7 Confidence 99.84% Date Thu Apr 26 09:30:42 BST 2012 Rank 34 Aligned Residues 177 % Identity 31% Template c3eo2A_ PDB info PDB header:splicing Chain: A: PDB Molecule:neuroepithelial cell-transforming gene 1 protein; PDBTitle: crystal structure of the rhogef domain of human neuroepithelial cell-2 transforming gene 1 protein Resolution 2.60 Å

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		780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.		.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.								.	850	.
Predicted Secondary structure																																									.																															.	.	.	.	.	.	.
Query SS confidence																																									.																															.	.	.	.	.	.	.
Query Sequence		R	M	L	E	K	R	A	K	V	I	E	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	I	M	V	P	M	Q	Q	A	Q	.	V	P	N	I	D	F	E	G	L	F	G	N	M	Q	M	V	I	K	V	S	K	Q	L	L	A	A	L	E	I	S	.	.	.	.	.	.	.	D	A	V
Query Conservation																																									.																															.	.	.	.	.	.	.
Alig confidence																																									.																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	E	I	R	R	Q	E	A	I	Y	E	M	S	R	G	E	Q	D	L	I	E	D	L	K	L	A	R	K	A	Y	H	D	P	M	L	K	L	S	I	M	S	E	E	E	L	T	H	I	F	G	D	L	D	S	Y	I	P	L	H	E	D	L	L	T	R	I	G	E	A	T	K	P	D	G	T	V	E	Q	I
Template Known Secondary structure																																T								T	S	S																														B		T	T	S		B	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		852	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	V	F	L	G	H	R	D	E	L	E	G	T	Y	K	I	Y	C	Q	N	H	D	E	A	I	A	L	L	E	I	Y	E	K	D	E	K	I	Q	K	H	L	Q	D	S	L	A	D	L	K	S	L	Y	N	E	W	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	V	M	R	Y	P	L
Query Conservation
Alig confidence													.																																								.	.	.	.	.	.	.	.
Template Conservation													.																																								.	.	.	.	.	.	.	.
Template Sequence		G	H	I	L	V	S	W	L	P	R	L	.	N	A	Y	R	G	Y	C	S	N	Q	L	A	A	K	A	L	L	D	Q	K	K	Q	D	P	R	V	Q	D	F	L	Q	R	C	L	E	S	P	F	S	.	.	.	.	.	.	.	.	R	K	L	D	L	W	S	F	L	D	I	P	R	S	R	L	V	K	Y	P	L
Template Known Secondary structure									G	G	G	G	.	G	G	G					T	T												T	T														S	T	T		.	.	.	.	.	.	.	.					G	G	G	T	T
Template Predicted Secondary structure													.																																								.	.	.	.	.	.	.	.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.									300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		932	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	M	E	L	L	N	S	T	P	E	S	H	P	D	K	V	P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	K	E	I	L	K	H	T	P	K	E	H	P	D	V	Q	L	L	E	D	A	I	L	I	I	Q	G	V	L	S	D	I	N
Template Known Secondary structure									T	S		T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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