Job Description Q6XZF7 Confidence 99.31% Date Thu Apr 26 09:30:42 BST 2012 Rank 227 Aligned Residues 57 % Identity 28% Template c2vknA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:protein ssu81; PDBTitle: yeast sho1 sh3 domain complexed with a peptide from pbs2 Resolution 2.05 Å

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		1515	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530			.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		N	Q	V	Y	F	A	V	Y	T	F	K	A	R	N	P	N	.	.	E	L	S	V	S	A	N	Q	K	L	K	I	L	E	F	K	D	V	T	G	N	T	E	W	W	L	A	E	V	N	G	K	K	G	Y	V	P	S	N	Y	I	R	K	T	E
Query Conservation																		.	.
Alig confidence																		.	.																		.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		I	Y	K	A	K	A	L	Y	P	Y	D	A	D	D	D	D	A	Y	E	I	S	F	E	Q	N	E	I	L	Q	V	S	D	I	E	G	.	.	.	.	R	W	W	K	A	R	R	A	N	G	E	T	G	I	I	P	S	N	Y	V	Q	L	I	D
Template Known Secondary structure								S	S		B				S	S	S	T	T	B			B		T	T								T	T	S	.	.	.	.	S							T	T	S							G	G	G
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions