Job Description Q6XZF7 Confidence 92.13% Date Thu Apr 26 09:30:42 BST 2012 Rank 275 Aligned Residues 181 % Identity 12% Template c2q13A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:dcc-interacting protein 13 alpha; PDBTitle: crystal structure of bar-ph domain of appl1 Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1021	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.						.	.	.	.	1090	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		E	V	F	E	E	T	E	K	N	F	R	M	Q	E	R	L	I	K	S	F	I	R	D	L	S	L	Y	L	Q	H	I	R	E	S	A	C	V	K	V	V	A	A	V	S	M	W	D	V	C	M	E	R	G	H	R	D	L	E	Q	F	E	R	V	H	R	.	.	.	.	.	Y	I	S	D	Q	L	F	T	N	F
Query Conservation																																																																			.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.
Template Conservation
Template Sequence		S	L	L	G	V	F	E	E	D	A	T	A	I	S	N	Y	M	N	Q	L	Y	Q	A	M	H	R	I	Y	D	A	Q	N	E	L	S	A	A	T	H	L	T	S	K	L	L	K	E	Y	E	K	Q	R	F	P	L	D	E	V	M	S	S	T	L	Q	Q	F	S	K	V	I	D	E	L	S	S	C	H	A	V	L
Template Known Secondary structure																																																T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		1096	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.		.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.									.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.
Predicted Secondary structure																				.																																	.	.	.	.	.	.	.	.
Query SS confidence																				.																																	.	.	.	.	.	.	.	.
Query Sequence		K	E	R	T	E	R	L	V	I	S	P	L	N	Q	L	L	S	M	.	F	T	G	P	H	K	L	V	Q	K	R	F	D	K	L	L	D	F	Y	N	C	T	E	R	A	E	K	L	K	D	K	K	.	.	.	.	.	.	.	.	T	L	E	E	L	Q	S	A	R	N	N	Y	E	A	L	N	A	Q	L	L	D
Query Conservation																				.																																	.	.	.	.	.	.	.	.
Alig confidence																				.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	Q	L	A	D	A	M	M	F	P	I	T	Q	F	K	E	R	D	L	K	E	I	L	T	L	K	E	V	F	Q	I	A	S	N	D	H	D	A	A	I	N	R	Y	S	R	L	S	K	K	R	E	N	D	K	V	K	Y	E	V	T	E	D	V	Y	T	S	R	K	K	Q	H	Q	T	M	M	H	Y	F	C
Template Known Secondary structure									T										T																												T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		1167	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	K	F	H	Q	Y	A	Q	G	L	F	T	N	C	V	H	G	Y	A	E	A	H	C	D	F	V	H	Q	A	L	E	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	N	T	L	Q	Y	K	K	K	I	A	L	L	E	P	L	L	G	Y	M	Q	A	Q	I	S	F	F	K	M	G	S	E	N	L
Template Known Secondary structure																																				S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions