Job Description Q6XZF7 Confidence 20.42% Date Thu Apr 26 09:30:42 BST 2012 Rank 414 Aligned Residues 67 % Identity 18% Template c2pmzE_ PDB info PDB header:translation, transferase Chain: E: PDB Molecule:dna-directed rna polymerase subunit e; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus Resolution 3.40 Å

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		21	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	P	L	F	V	G	D	I	I	E	.	V	L	A	V	V	D	E	F	W	L	L	G	K	K	E	D	V	T	G	Q	F	P	S	S	F	V	E	I	V	T	I	P	S	L	K	E	G	E	R	L	F	V	C	I	C	E	F	T	S	Q	E	L	D	N	L	P	L	H	R	G	D	L	V	I	L
Query Conservation												.
Alig confidence												.																																											.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.
Template Sequence		Y	V	P	V	V	Q	E	V	V	E	G	E	V	L	Q	V	D	N	Y	G	I	F	V	N	L	G	P	M	D	G	L	V	H	I	S	Q	I	T	D	D	T	L	K	Y	D	N	V	R	G	I	I	F	G	.	.	.	.	.	.	.	.	E	K	S	K	K	V	I	Q	K	G	D	K	V	R	A
Template Known Secondary structure						S	S												S	S							S	S	S						S	T	T	T		S	S					B	T	T	T	T	B				.	.	.	.	.	.	.	.	S	S	S						T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions