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Job DescriptionQ6XZF7
Confidence99.67%DateThu Apr 26 09:30:42 BST 2012
Rank41Aligned Residues189
% Identity22%Templatec2ficA_
PDB info PDB header:endocytosis/exocytosis, membrane proteinChain: A: PDB Molecule:bridging integrator 1; PDBTitle: the crystal structure of the bar domain from human bin1/amphiphysin ii2 and its implications for molecular recognition
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1021........1030.........1040.........1050.........1060.........1070.........1080.........1090.........1100
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Query Sequence  EVFEETEKNFRMQERLIKSFIRDLSLYLQHIRESACVKVVAAVSMWDVCMERGHRDLEQFERVHRYISDQLFTNFKERTE
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Template Sequence  EQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEPDWPGRDEA. . NKIAENNDLLWMDYHQKLV
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   52.......60.........70.........80.........90.........100.........110 .........120.........
 
   1101........1110.........1120.........1130.........1140.... .....1150.........1160.........1170........
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Query Sequence  RLVISPLNQLLSMFTGPHKLVQKRFDKLLDFYNCTERAEKLKDK. . KTLEELQSARNNYEALNAQLLDELPKFHQYAQGL
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Template Sequence  DQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGF
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   130.........140.........150.........160.........170.........180.........190.........200.........
 
   11791180.........1190.........1200.........1210.
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Query Sequence  FTNCVHGYAEAHCDFVHQALEQLKPLLSLLKVA
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Template Sequence  YVNTFQSIAGLEENFHKEMSKLNQNLNDVLVGL
Template Known Secondary structure  T
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   217..220.........230.........240.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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