Return to main results Retrieve Phyre Job Id

Job DescriptionQ6XZF7
Confidence99.48%DateThu Apr 26 09:30:42 BST 2012
Rank95Aligned Residues65
% Identity12%Templatec2ebpA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:sam and sh3 domain-containing protein 1; PDBTitle: solution structure of the sh3 domain from human sam and sh32 domain containing protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1507..1510.........1520.... .....1530.........1540.........1550.........1560.........1570.....
Predicted Secondary structure 










..






























Query SS confidence 

















. .


















































Query Sequence  PDGSEAEGNQVYFAVYTF. . KARNPNELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE
Query Conservation               
 


.. 
   




  

 
 
    
      

 

  
  
 

 


    
Alig confidence 

















..






















....























Template Conservation 
 


 
  




   
       




  



 
     .... 


 
   
  
 

  


 
 
Template Sequence  GSSGSSGFCGRARVHTDFTPSPYDTDSLKLKKGDIIDIISKPP. . . . MGTWMGLLNNKVGTFKFIYVDVLS
Template Known Secondary structure 


S



S
S
B


TT

SB

B
SS


S....SS

SS

STT

Template Predicted Secondary structure 



























....









Template SS confidence 






































































   1........10.........20.........30.........40... ......50.........60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions