Job Description Q6XZF7 Confidence 99.68% Date Thu Apr 26 09:30:42 BST 2012 Rank 40 Aligned Residues 114 % Identity 31% Template c2dybA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: the crystal structure of human p40(phox) Resolution 3.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	V	V	R	A	I	F	D	F	C	P	S	V	S	E	E	L	P	L	F	V	G	D	I	I	E	V	L	A	V	V	D	E	F	W	L	L	G	K	K	E	D	V	T	G	Q	F	P	S	S	F	V	E	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	P	R	A	E	A	L	F	D	F	T	G	N	S	K	L	E	L	N	F	K	A	G	D	V	I	F	L	L	S	R	I	N	K	D	W	L	E	G	T	V	R	G	A	T	G	I	F	P	L	S	F	V	K	I	L	K	D	F	P	E	E	D	D	P	T	N	W	L	R	C	Y	Y	Y	E	D	T	I	S	T
Template Known Secondary structure								S	S		B			S	S	S	S	B			B		T	T										S	S	S							T	T							G	G	G										T	T													S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																														.	.																	.	.
Query SS confidence		.	.	.	.	.	.	.	.																														.	.																	.	.
Query Sequence		.	.	.	.	.	.	.	.	T	I	P	S	L	K	E	G	E	R	L	F	V	C	I	C	E	F	T	S	Q	E	L	D	N	L	P	L	H	.	.	R	G	D	L	V	I	L	D	G	I	P	T	A	G	W	L	.	.	Q	G	R	S	C	W	G	A	R	G	F	F	P
Query Conservation		.	.	.	.	.	.	.	.																														.	.																	.	.
Alig confidence		.	.	.	.	.	.	.	.																														.	.																	.	.
Template Conservation
Template Sequence		I	K	D	I	A	V	E	E	D	L	S	S	T	P	L	L	K	D	L	L	E	L	T	R	R	E	F	Q	R	E	D	I	A	L	N	Y	R	D	A	E	G	D	L	V	R	L	L	S	D	E	D	V	A	L	M	V	R	Q	A	R	G	L	P	S	Q	K	R	L	F	P
Template Known Secondary structure									S		T	T																	T		S									S	S	S							S												T	T	S			B	T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions