Job Description Q6XZF7 Confidence 99.89% Date Thu Apr 26 09:30:42 BST 2012 Rank 18 Aligned Residues 200 % Identity 20% Template c1xdvB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:son of sevenless protein homolog 1; PDBTitle: experimentally phased structure of human the son of2 sevenless protein at 4.1 ang. Resolution 4.10 Å

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		785	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.			.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850											.	.
Predicted Secondary structure																																			.	.																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	K	V	I	E	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	I	M	V	P	M	Q	Q	A	.	.	Q	V	P	N	I	D	F	E	G	L	F	G	N	M	Q	M	V	I	K	V	S	K	Q	L	L	A	A	L	E	I	S	D	A	.	.	.	.	.	.	.	.	.	.	V	G
Query Conservation																																			.	.																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Y	D	L	V	K	A	F	M	A	E	I	R	Q	Y	I	R	E	L	N	L	I	I	K	V	F	R	E	P	F	V	S	N	S	K	L	F	S	A	N	D	V	E	N	I	F	S	R	I	V	D	I	H	E	L	S	V	K	L	L	G	H	I	E	D	T	V	E	M	T	D	E	G	S	P	H	P	L	V	G
Template Known Secondary structure																										T	T	T							T	T	T											T	T																					T			T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		853	.	.	.	.	.	.	860	.	.	.		.	.	.	.	.	.	870	.	.	.	.	.	.	.	.			.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.																.	.
Query SS confidence													.																.	.
Query Sequence		P	V	F	L	G	H	R	D	E	L	E	.	G	T	Y	K	I	Y	C	Q	N	H	D	E	A	I	A	.	.	L	L	E	I	Y	E	K	D	E	K	I	Q	K	H	L	Q	D	S	L	A	D	L	K	S	L	Y	N	E	W	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	V	M	R	Y
Query Conservation													.																.	.
Alig confidence													.																.	.																												.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		S	C	F	E	D	L	A	E	E	L	A	F	D	P	Y	E	S	Y	A	R	D	I	L	R	P	G	F	H	D	R	F	L	S	Q	L	S	K	P	G	A	A	L	Y	L	Q	S	I	G	E	G	F	K	E	A	V	Q	.	.	.	.	.	.	.	Y	V	L	P	R	L	L	L	A	P	V	Y	H	C	L	H	Y
Template Known Secondary structure										T	T	T	T											T	S	T	T											S	T	T										T	T							.	.	.	.	.	.	.		T					T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.								.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	L	M	E	L	L	N	S	T	P	E	S	H	P	D	K	V	P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D	L	V	L	K	Y	R	K	G	D	E	D	S	L	M	E	K	I	S	K	L
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		F	E	L	L	K	Q	L	E	E	K	S	E	.	D	Q	E	D	K	E	C	L	K	Q	A	I	T	A	L	L	N	V	Q	S	G	M	E	K	I	C	S	K	S	L	A	K	R	R	L	S	E	S	A	I	K	K	M	N	E	I	Q	K	N	I
Template Known Secondary structure													S	.															T													S										T										T	T
Template Predicted Secondary structure														.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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