Job Description Q6XZF7 Confidence 99.91% Date Thu Apr 26 09:30:42 BST 2012 Rank 13 Aligned Residues 211 % Identity 19% Template c1x86A_ PDB info PDB header:signaling protein/membrane protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 12; PDBTitle: crystal structure of the dh/ph domains of leukemia-associated rhogef2 in complex with rhoa Resolution 3.22 Å

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		763	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.		.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		S	S	L	V	A	P	S	G	S	V	S	A	E	N	P	E	Q	R	M	L	E	K	R	A	K	V	I	E	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	I	M	V	P	M	Q	Q	A	Q	.	V	P	N	I	D	F	E	G	L	F	G	N	M	Q	M	V	I	K	V	S	K	Q	L
Query Conservation																																																										.
Alig confidence																																																										.
Template Conservation
Template Sequence		P	P	N	W	Q	Q	L	V	S	R	E	V	L	L	G	L	K	P	C	E	I	K	R	Q	E	V	I	N	E	L	F	Y	T	E	R	A	H	V	R	T	L	K	V	L	D	Q	V	F	Y	Q	R	V	S	R	E	G	I	L	S	P	S	E	L	R	K	I	F	S	N	L	E	D	I	L	Q	L	H	I	G	L
Template Known Secondary structure					G	G	G	T	S						T	T	S		T	T																													T								S		S										T	T
Template Predicted Secondary structure
Template SS confidence
		766	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.
		842	.	.	.	.	.	.										.	850	.	.	.	.	.	.	.	.						.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.		.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.											.	.	.	.	.																												.
Query SS confidence									.	.	.	.	.	.	.	.	.											.	.	.	.	.																												.
Query Sequence		L	A	A	L	E	I	S	.	.	.	.	.	.	.	.	.	D	A	V	G	P	V	F	L	G	H	.	.	.	.	.	R	D	E	L	E	G	T	Y	K	I	Y	C	Q	N	H	D	E	A	I	A	L	L	E	I	Y	E	K	.	D	E	K	I	Q	K	H	L	Q	D	S	L	A	D	L	K	S	L	Y	N	E
Query Conservation									.	.	.	.	.	.	.	.	.											.	.	.	.	.																												.
Alig confidence									.	.	.	.	.	.	.	.	.											.	.	.	.	.																												.													.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.
Template Sequence		N	E	Q	M	K	A	V	R	K	R	N	E	T	S	V	I	D	Q	I	G	E	D	L	L	T	W	F	S	G	P	G	E	E	K	L	K	H	A	A	A	T	F	C	S	N	Q	P	F	A	L	E	M	I	K	S	R	Q	K	K	D	S	R	F	Q	T	F	V	Q	D	A	E	.	.	.	.	.	.	.	.	S
Template Known Secondary structure													S	S	S	S													S																	T																											.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.
Template SS confidence
		846	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.									.
		907	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	V	M	R	Y	P	L	L	L	M	E	L	L	N	S	T	P	E	S	H	P	D	K	V	P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D	L	V	L	K	Y	R	K	G	D	E
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		N	P	L	C	R	R	L	Q	L	K	D	I	I	P	T	Q	M	Q	R	L	T	K	Y	P	L	L	L	D	N	I	A	K	Y	T	E	W	.	P	T	E	R	E	K	V	K	K	A	A	D	H	C	R	Q	I	L	N	F	V	N	Q	A	V	K	E	A	E	N	K	Q	R	L	E	D	Y	Q	R
Template Known Secondary structure		S	G	G	G	T	T							T	T																			T				.
Template Predicted Secondary structure																																						.
Template SS confidence
		918	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.		.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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