Job Description Q6XZF7 Confidence 99.84% Date Thu Apr 26 09:30:42 BST 2012 Rank 35 Aligned Residues 172 % Identity 25% Template c1ntyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:triple functional domain protein; PDBTitle: crystal structure of the first dh/ph domain of trio to 1.7 a Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		783	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.						.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.						.	850	.	.
Predicted Secondary structure																																						.	.	.	.	.																															.	.	.	.	.
Query SS confidence																																						.	.	.	.	.																															.	.	.	.	.
Query Sequence		E	K	R	A	K	V	I	E	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	I	M	V	P	M	Q	Q	A	Q	.	.	.	.	.	V	P	N	I	D	F	E	G	L	F	G	N	M	Q	M	V	I	K	V	S	K	Q	L	L	A	A	L	E	I	S	.	.	.	.	.	D	A	V	G
Query Conservation																																						.	.	.	.	.																															.	.	.	.	.
Alig confidence																																						.	.	.	.	.																															.	.	.	.	.
Template Conservation
Template Sequence		R	R	K	E	F	I	M	A	E	L	I	Q	T	E	K	A	Y	V	R	D	L	R	E	C	M	D	T	Y	L	W	E	M	T	S	G	V	E	E	I	P	P	G	I	V	N	K	E	L	I	I	F	G	N	M	Q	E	I	Y	E	F	H	N	N	I	F	L	K	E	L	E	K	Y	E	Q	L	P	E	D	V	G
Template Known Secondary structure																																						S				T	T	T	T	T							T	T											T								T	T	T		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		1232	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.
		853	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	F	L	G	H	R	D	E	L	E	G	T	Y	K	I	Y	C	Q	N	H	D	E	A	I	A	L	L	E	I	Y	E	K	D	E	K	I	Q	K	H	L	Q	D	S	L	A	D	L	K	S	L	Y	N	E	W	G	C	T	N	Y	I	N	L	G	S	F	L	I	K	P	V	Q	R	V	M	R	Y	P	L	L
Query Conservation
Alig confidence												.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	C	F	V	T	W	A	D	K	F	.	Q	M	Y	V	T	Y	C	K	N	K	P	D	S	T	Q	L	I	L	E	H	A	G	S	Y	F	D	E	I	Q	Q	R	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	N	S	I	S	S	Y	L	I	K	P	V	Q	R	I	T	K	Y	Q	L	L
Template Known Secondary structure							T	T	T	T	T	.																					T	T	T										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S							T
Template Predicted Secondary structure												.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1312	.	.	.	.	.	.	.	1320	.		.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.															.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.
		933	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	E	L	L	N	S	T	P	E	S	H	P	D	K	V	P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		L	K	E	L	L	T	C	C	E	E	G	K	G	E	.	.	.	I	K	D	G	L	E	V	M	L	S	V	P	K	R	A	N	D	A	M	H	L	S	M
Template Known Secondary structure								T	S		T	T		T	T	.	.	.																						T	T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		1377	.	.	1380	.	.	.	.	.	.	.	.	.	1390				.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions