Job Description Q6XZF7 Confidence 99.83% Date Thu Apr 26 09:30:42 BST 2012 Rank 38 Aligned Residues 200 % Identity 7% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		1375	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	Q	N	S	G	S	T	L	T	F	N	P	S	S	M	A	V	S	F	T	S	G	S	C	Q	K	Q	P	Q	D	A	S	P	P	P	K	E	C	D	Q	G	T	L	S	A	S	L	N	P	S	N	S	E	S	S	P	S	R	C	P	S	D	P	D	S	T	S	Q	P	R	S	G	D	S	A	D	V	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A
Template Known Secondary structure																																			S										S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		1455	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	K	Q	P	T	A	T	P	R	S	Y	R	N	F	R	H	P	E	I	V	G	Y	S	V	P	G	R	N	G	Q	S	Q	D	L	V	K	G	C	A	R	T	A	Q	A	P	E	D	R	S	T	E	P	D	G	S	E	A	E	G	N	Q	V	Y	F	A	V	Y	T	F	K	A	R	N	P	N	E	L	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L
Template Known Secondary structure							S	S																																															S	S			T	T								S	S		B				S	T	T				B
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		1535	.	.	.	.	1540	.	.	.	.	.	.	.	.	.		1550	.	.	.	.	.	.	.											.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.
Predicted Secondary structure																	.									.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.									.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	N	Q	K	L	K	I	L	E	F	K	D	V	T	.	G	N	T	E	W	W	L	A	.	.	.	.	.	.	.	.	.	.	E	V	N	G	K	K	G	Y	V	P	S	N	Y	I	R	K	T
Query Conservation																	.									.	.	.	.	.	.	.	.	.	.
Alig confidence																	.									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure			S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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