Job Description Q6XZF7 Confidence 99.91% Date Thu Apr 26 09:30:42 BST 2012 Rank 12 Aligned Residues 192 % Identity 29% Template c1foeA_ PDB info PDB header:signaling protein, immune system/signali Chain: A: PDB Molecule:t-lymphoma invasion and metastasis inducing PDBTitle: crystal structure of rac1 in complex with the guanine2 nucleotide exchange region of tiam1 Resolution 2.80 Å

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		780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.		.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850
Predicted Secondary structure																																									.																																	.	.	.	.	.	.	.	.
Query SS confidence																																									.																																	.	.	.	.	.	.	.	.
Query Sequence		R	M	L	E	K	R	A	K	V	I	E	E	L	L	Q	T	E	R	D	Y	I	R	D	L	E	M	C	I	E	R	I	M	V	P	M	Q	Q	A	Q	.	V	P	N	I	D	F	E	G	L	F	G	N	M	Q	M	V	I	K	V	S	K	Q	L	L	A	A	L	E	I	S	D	A	.	.	.	.	.	.	.	.
Query Conservation																																									.																																	.	.	.	.	.	.	.	.
Alig confidence																																									.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	A	D	K	L	R	K	V	I	C	E	L	L	E	T	E	R	T	Y	V	K	D	L	N	C	L	X	E	R	Y	L	K	P	L	Q	K	E	T	F	L	T	Q	D	E	L	D	V	L	F	G	N	L	T	E	X	V	E	F	Q	V	E	F	L	K	T	L	E	D	G	V	R	L	V	P	D	L	E	K	L
Template Known Secondary structure																																T						T	S	S	S	S										S	S																				T	T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		1036	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.
														851	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	G	P	V	F	L	G	H	R	D	E	L	E	G	T	Y	K	I	Y	C	Q	N	H	D	E	A	I	A	L	L	E	I	Y	E	K	D	E	K	I	Q	K	H	L	Q	D	S	L	A	D	L	K	S	L	Y	N	E	W	G	C	T	N	Y	I	N	L	G	S	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.													.																																							.	.	.	.	.	.	.	.	.
Template Conservation																										.																																							.	.	.	.	.	.	.	.	.
Template Sequence		E	K	V	D	Q	F	K	K	V	L	F	S	L	G	G	S	F	L	Y	Y	A	D	R	F	.	K	L	Y	S	A	F	C	A	S	H	T	K	V	P	K	V	L	V	K	A	K	T	D	T	A	F	K	A	F	L	D	A	Q	N	P	R	Q	Q	.	.	.	.	.	.	.	.	.	H	S	S	T	L	E	S	Y
Template Known Secondary structure			S	G	G	G	G															T	T	G	G	.	G	G								T	T	T						T	T	T	T	T													T	T			.	.	.	.	.	.	.	.	.	G	G	G	S
Template Predicted Secondary structure																										.																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		1116	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.										.	.	1180	.	.	.	.	.
		919	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	K	P	V	Q	R	V	M	R	Y	P	L	L	L	M	E	L	L	N	S	T	P	E	S	H	P	D	K	V	P	L	T	N	A	V	L	A	V	K	E	I	N	V	N	I	N	E	Y	K	R	R	K	D	L	V	L	K	Y	R	K	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	K	P	I	Q	R	V	L	K	Y	P	L	L	L	R	E	L	F	A	L	T	D	A	E	S	E	E	H	Y	H	L	D	V	A	I	K	T	X	N	K	V	A	S	H	I	N	E	X	Q	K	I	H	E	E	F	G	A	V	F	D	Q	L
Template Known Secondary structure		T	T							T	T											T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		1186	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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