Job Description A0PJW8 Confidence 5.28% Date Thu Apr 26 09:47:47 BST 2012 Rank 9 Aligned Residues 54 % Identity 22% Template c3cw4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:polymerase basic protein 2; PDBTitle: large c-terminal domain of influenza a virus rna-dependent polymerase2 pb2 Resolution 2.70 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.													.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Query Sequence		V	K	A	G	G	M	R	I	S	K	K	Q	E	I	G	.	.	.	.	.	.	.	.	.	.	.	.	T	L	E	R	H	T	K	K	T	G	F	E	K	T	S	A	I	A	N	V	A	K	I	Q	T	L	D	A	L	N	D	A	L	E	K	L	N	Y	K	F	.	P
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																																									.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																														.	.										.
Template Conservation																																																										.	.
Template Sequence		V	R	G	S	G	M	R	I	L	V	R	G	N	S	P	V	F	N	Y	N	K	A	T	K	R	L	T	V	L	G	K	D	A	G	T	L	T	E	D	P	D	E	G	T	A	G	V	E	S	A	V	L	R	G	F	L	.	.	I	L	G	K	E	D	K	R	Y	G	P
Template Known Secondary structure			S	S	S						S	S	S		B	T	T	B				S	S	S					S	S	S	S									T	T				S	S		B	S	S	S	S	T	T			.	.							G	G	G		S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions