Job Description A1A4S6 Confidence 97.91% Date Wed May 9 18:01:49 BST 2012 Rank 323 Aligned Residues 212 % Identity 14% Template c3qweA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:gem-interacting protein; PDBTitle: crystal structure of the n-terminal domain of the gem interacting2 protein Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	R	A	H	E	A	E	L	E	R	T	N	K	F	I	K	E	L	I	K	D	G	K	N	L	I	A	A	T	K	S	L	S	V	A	Q	R	K	F	A	H	S	L	R	D	F	K	F	E	F	I	G	D	A	V	T	D	D	E	R	C	I	D	A	S	L	R	E	F	S	N	F	L	K	N	L	E	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	I	R	T	K	G	G	V	D	A	A	L	E	Y	A	K	T	W	S	R	Y	A	K	E	L	L	A	W	T	E	K	R	A	S	Y	E	L	E	F	A	K	S	T	M	K	I	A	E	A	G	K	V	S	I	Q	Q	Q	S	H	M	P	L	Q	Y	I	Y	T	L	F	L	E	H	D	L	S	L	G	T	L
Template Known Secondary structure						S	T	T																																																	T	T			S		T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.													.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	I	M	A	L	S	V	T	E	T	L	I	K	P	L	E	K	F	R	K	E	Q	L	G	A	V	K	E	E	K	K	K	F	D	K	E	T	E	K	N	Y	S	L	I	D	K	H	L	N	L	S	A	K	.	.	.	.	.	.	.	.	.	.	.	.	K	K	D	S	H	L	Q	E	A	D	I	Q	V	E
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	M	E	T	V	A	Q	Q	K	R	D	Y	Y	Q	P	L	A	A	K	R	T	E	I	E	K	W	R	K	E	F	K	E	Q	W	M	K	E	Q	K	R	M	N	E	A	V	Q	A	L	R	R	A	Q	L	Q	Y	V	Q	R	S	E	D	L	R	A	R	S	Q	G	S	K	Q	Q	E	R	R	R	R	S	R	E
Template Known Secondary structure													T																																																					T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.									.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																													.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.										.	.	.	.	.	.	.	.
Query Sequence		Q	N	R	Q	H	F	Y	E	L	S	L	E	Y	V	C	K	L	Q	E	I	Q	E	R	K	K	F	E	.	.	.	.	.	.	F	V	E	P	M	L	S	F	F	.	.	.	.	.	.	.	.	Q	G	M	F	T	F	Y	H	Q	G	H	E	L	A	K	D	F	N	H	Y	K	M	E	L	Q	I	N	I
Query Conservation																													.	.	.	.	.	.										.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	Q	A	K	A	Q	E	A	E	A	L	Y	Q	A	C	V	R	E	A	N	A	R	Q	Q	D	L	E	I	A	K	Q	R	I	V	S	H	V	R	K	L	V	F	Q	G	D	E	V	L	R	R	V	T	L	S	L	F	G	L	R	G	A	Q	A	E	R	G	P	R	A	F	A	A	L	A	E	C	C
Template Known Secondary structure																																																																		T													T
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions