Return to main results Retrieve Phyre Job Id

Job DescriptionA1A4S6
Confidence98.49%DateWed May 9 18:01:49 BST 2012
Rank310Aligned Residues98
% Identity18%Templatec3nsuA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:phosphatidylinositol 4,5-bisphosphate-binding protein slm1; PDBTitle: a systematic screen for protein-lipid interactions in saccharomyces2 cerevisiae
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310.........320.........330... .
Predicted Secondary structure 


















































........
Query SS confidence 






































































. . . . . . . .
Query Sequence  ASQFTAEGYLYVQEKRPAPFGSSWVKHYCMYRKAAKKFNMIPFEHRSGGKLGDGEVFFLKECTKRHTDSID. . . . . . . . R
Query Conservation         
 
    
        
 

                               
  
  
      ........
Alig confidence 










...


.




















...




























........
Template Conservation 
   
  
 
 ...

 .   
 

 
 


    
 
 ...                                      
Template Sequence  PFTEIKSGFLE. . . RRS. KFLKSYSKGYYVLTPNFLHEF. . . KTADRKKDLVPVMSLALSECTVTEHSRKNSTSSPNSTG
Template Known Secondary structure 



S...
.SSSSS
SS...SSS
TTT

S
SGGG



SSSS

TTS
Template Predicted Secondary structure 


...
.







...

































Template SS confidence 















































































   466...470...... ... 480.........490.........500 .........510.........520.........530........
 
   335....340.........350.........360.........370
Predicted Secondary structure 















Query SS confidence 



































Query Sequence  RFCFDIEAADRPGVSLTMQAFSEEERKQWLEALGGK
Query Conservation 



 
 
         





 
   

 
    
Alig confidence 







...
























Template Conservation          ...      
 
 
  
   
  

   
Template Sequence  SDAKFVLH. . . AKHNWVFKADSYESMMSWFDNLKIL
Template Known Secondary structure 
S
...


SSTT
Template Predicted Secondary structure 


...




Template SS confidence 



































   539540...... ...550.........560.........570.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions