Job Description A1A4S6 Confidence 97.85% Date Wed May 9 18:01:49 BST 2012 Rank 326 Aligned Residues 158 % Identity 23% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

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		402	.	.	.	.	.	.	.													410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430																	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	I	S	A	V	E	T	R	.	.	.	.	.	.	.	.	.	.	.	.	G	I	N	D	Q	G	L	Y	R	V	V	G	V	S	.	S	K	V	Q	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	L	M	D	V	K	T	C	N	E	V	D	L	E	N	S	A	D	W	E	V
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	C	D	C	G	A	A	D	P	T	W	L	S	T	N	L	G	V	L	T	C	I	Q	C	S	G	V	H	R	E	L	G	V	R	F	S	R	M	Q	S	L	T	L	D	L	L	G	P	S	E	L	L	L	A	L	N	M	G	N	T	S	F	N	E	V	M	E	A	Q	L	P	S	H	G	G	P	K	P	S	A
Template Known Secondary structure			T	T	T			B	S						T	T	T	T																T	T	T						T	T	T	S				G	G	G	G																T	T	T			S	T	T		S				T
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		453	.	.	.	.	.	.	460	.	.	.	.	.											.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.																								.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	I	T	S	A	L	K	Q	Y	L	R	S	.	.	.	.	.	.	.	.	.	.	L	P	E	P	L	M	T	Y	E	L	H	G	D	F	I	V	P	A	K	S	G	S	P	E	S	R	V	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	F	L	V
Query Conservation															.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.
Template Sequence		E	S	D	M	G	T	R	R	D	Y	I	M	A	K	Y	V	E	H	R	F	A	R	R	C	T	E	P	.	.	.	.	.	.	.	Q	R	L	W	T	A	I	C	N	R	D	L	L	S	V	L	E	A	F	A	N	G	Q	D	F	G	Q	P	L	P	G	P	D	A	Q	A	P	E	E	L	V	L	H	L	A	V
Template Known Secondary structure		T															T	T		T	T	S							.	.	.	.	.	.	.										T											T	T			T	T	S					S	S	S			S
Template Predicted Secondary structure																													.	.	.	.	.	.	.
Template SS confidence
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.								.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.																.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	K	L	P	E	K	N	K	E	M	L	D	I	L	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	T	N	V	S	N	H	S	K	Q	N	L	M	T	V	A	N	L	G	V	V	F	G	P	T	L	M	R	P	Q	E	E	T	V	A	A	L	M	D	L	K	F	Q	N	I	V	V	E
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																																							.	.	.
Template Sequence		K	V	A	N	Q	A	S	L	P	L	V	D	F	I	I	Q	N	G	G	H	L	D	A	K	A	D	G	N	T	A	L	H	Y	A	A	L	Y	N	Q	P	D	C	L	K	L	L	L	K	G	R	A	L	V	.	.	.	G	T	V	N	E	A	G	E	T	A	L	D	I	A	R	K	K	H	H	K	E	C	E	E
Template Known Secondary structure			T			T	T	T											T			T	T															T	T											T					.	.	.	S				T	T											T	T		T	T
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.				.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
		565	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	E	Q	A
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		673	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions