Job Description A1A4S6 Confidence 96.76% Date Wed May 9 18:01:49 BST 2012 Rank 351 Aligned Residues 159 % Identity 17% Template c3jueA_ PDB info PDB header:protein transport/endocytosis Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain- PDBTitle: crystal structure of arfgap and ank repeat domain of acap1 Resolution 2.30 Å

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		402	.	.	.	.	.	.	.													410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430																	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	I	S	A	V	E	T	R	.	.	.	.	.	.	.	.	.	.	.	.	G	I	N	D	Q	G	L	Y	R	V	V	G	V	S	.	S	K	V	Q	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	L	M	D	V	K	T	C	N	E	V	D	L	E	N	S	A	D	W	E	V
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	C	D	C	R	E	P	A	P	E	W	A	S	I	N	L	G	V	T	L	C	I	Q	C	S	G	I	H	R	S	L	G	V	H	F	S	K	V	R	S	L	T	L	D	S	W	E	P	E	L	V	K	L	M	C	E	L	G	N	V	I	I	N	Q	I	Y	E	A	R	V	E	A	M	A	V	K	K	P	G	P
Template Known Secondary structure			T	T	T			B	S						T	T	T	T																T	T	T						T	T	T	S													S										T	T	T	T	T	T	T	T						T
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.	.							.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.																				.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	I	T	S	A	L	K	Q	Y	L	R	.	.	.	.	.	.	S	L	P	E	P	L	M	T	Y	E	L	H	G	D	F	I	V	P	A	K	S	G	S	P	E	S	R	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	H	F	L	V	H	K	L	P	E	K	N	K
Query Conservation														.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		S	C	S	R	Q	E	K	E	A	W	I	H	A	K	Y	V	E	K	K	F	L	T	K	L	P	L	H	P	G	A	L	L	F	R	A	S	G	H	P	P	S	L	P	T	M	A	D	A	L	A	H	G	A	D	V	N	W	V	N	G	G	Q	D	N	A	T	P	L	I	Q	A	T	A	A	.	.	.	N	S	L
Template Known Secondary structure		T	S														T	S		T	T			S													T	S	S	S												T	T			T	T				T	T	T	T											T	.	.	.	T
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.				.	.	.
		508	.	510	.	.	.	.	.																	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	L	D	I	L	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	T	N	V	S	N	H	S	K	Q	N	L	M	T	V	A	N	L	G	V	V	F	G	P	T	L	M	R	P	Q	E	E	T	V	A	A	L	M	D	L	K	F	Q	N	I	V	V	E	I	L
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																																.	.	.
Template Sequence		L	A	C	E	F	L	L	Q	N	G	A	N	V	N	Q	A	D	S	A	G	R	G	P	L	H	H	A	T	I	L	G	H	T	G	L	A	C	L	F	L	K	R	G	A	D	L	.	.	.	G	A	R	D	S	E	G	R	D	P	L	T	I	A	M	E	T	A	N	A	D	I	V	T	L	L
Template Known Secondary structure										T	T			T	T				T	T	S											T											T	T			T	.	.	.	T				T	T	S										T	T
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.				.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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