Job Description A1A4S6 Confidence 96.30% Date Wed May 9 18:01:49 BST 2012 Rank 358 Aligned Residues 198 % Identity 12% Template c3hahA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:human pacsin1 f-bar; PDBTitle: crystal structure of human pacsin1 f-bar domain (c2 lattice) Resolution 2.77 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		E	R	T	N	K	F	I	K	E	L	I	K	D	G	K	N	L	I	A	A	T	K	S	L	S	V	A	Q	R	K	F	A	H	S	L	R	D	F	K	F	E	F	I	G	D	A	V	T	D	D	E	R	C	.	I	D	A	S	L	R	E	F	S	N	F	L	K	N	L	E	E	Q	R	E	I	M	A	L	S	V
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		K	R	T	V	K	R	I	D	D	G	H	R	L	C	N	D	L	M	N	C	V	Q	E	R	A	K	I	E	K	A	Y	G	Q	Q	L	T	D	W	A	K	R	W	R	Q	L	I	E	K	G	P	Q	Y	G	S	L	E	R	A	W	G	A	I	M	T	E	A	D	K	V	S	E	L	H	Q	E	V	K	N	N	L
Template Known Secondary structure																																																		S	S
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																																											.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.																																											.	.	.
Query Sequence		T	E	T	L	I	K	P	L	E	K	F	R	K	E	Q	.	.	.	.	.	.	.	.	L	G	A	V	K	E	E	K	K	K	F	D	K	E	T	E	K	N	Y	S	L	I	D	K	H	L	N	L	S	A	K	K	K	D	S	H	L	Q	E	A	D	I	.	.	.	Q	V	E	Q	N	R	Q	H	F	Y	E	L
Query Conservation																	.	.	.	.	.	.	.	.																																											.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																																											.	.	.
Template Conservation
Template Sequence		L	N	E	D	L	E	K	V	K	N	W	Q	K	D	A	Y	H	K	Q	I	M	G	G	F	K	E	T	K	E	A	E	D	G	F	R	K	A	Q	K	P	W	A	K	K	M	K	E	L	E	A	A	K	K	A	Y	H	L	A	C	K	E	E	K	L	A	M	Q	D	K	V	D	K	C	K	Q	D	V	Q	K	T
Template Known Secondary structure				T															B		T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	E	Y	V	C	K	L	Q	E	I	Q	E	R	K	K	F	E	F	V	E	P	M	L	S	F	F	Q	G	M	F	T	F	Y	H	Q	G	H	E	L	A	K	D	F	N	H	Y	K	M	E	L	Q	I	N	I	Q	N	T
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.
Template Sequence		Q	E	K	Y	E	K	V	L	E	D	V	G	K	T	T	P	.	.	.	.	.	.	.	.	Q	Y	M	E	N	M	E	Q	V	F	E	Q	C	Q	Q	F	E	E	K	R	L	V	F	L	K	E	V	L	L	D	I	K	R	H
Template Known Secondary structure																		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.									.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions