Job Description A1A4S6 Confidence 99.97% Date Wed May 9 18:01:49 BST 2012 Rank 11 Aligned Residues 187 % Identity 29% Template c3fk2B_ PDB info PDB header:signaling protein, hydrolase activator Chain: B: PDB Molecule:glucocorticoid receptor dna-binding factor 1; PDBTitle: crystal structure of the rhogap domain of human2 glucocorticoid receptor dna-binding factor 1 Resolution 2.80 Å

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		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	I	P	R	P	E	G	N	A	Q	L	D	K	M	G	F	T	I	I	R	K	C	I	S	A	V	E	T	R	G	I	N	D	Q	G	L	Y	R	V	V	G	V	S	S	K	V	Q	R	L	L	S	M	L	M	D	V	K	T	C	N	E	V	D	L	E	N	S	A	D	W	E	V	K	T	I	T	S	A	L
Query Conservation
Alig confidence																.																																															.	.	.	.
Template Conservation																.																																															.	.	.	.
Template Sequence		F	G	V	P	L	T	T	V	V	T	P	E	K	P	.	I	P	I	F	I	E	R	C	I	E	Y	I	E	A	T	G	L	S	T	E	G	I	Y	R	V	S	G	N	K	S	E	M	E	S	L	Q	R	Q	F	D	Q	D	H	N	L	D	.	.	.	.	L	A	E	K	D	F	T	V	N	T	V	A	G	A	M
Template Known Secondary structure		T	T	S		G	G	G	G			S	S	S		.	S																T	T	S	T	T	T	T	T	S																		T	T			.	.	.	.	S	G	G	G	T
Template Predicted Secondary structure																.																																															.	.	.	.
Template SS confidence
		1247	.	.	1250	.	.	.	.	.	.	.	.	.	1260		.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.					.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	Y	L	R	S	L	P	E	P	L	M	T	Y	E	L	H	G	D	F	I	V	P	A	K	S	G	S	P	E	S	R	V	N	A	I	H	F	L	V	H	K	L	P	E	K	N	K	E	M	L	D	I	L	V	K	H	L	T	N	V	S	N	H	S	K	Q	N	L	M	T	V	A	N	L	G	V	V	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	F	F	S	E	L	P	D	P	L	V	P	Y	N	M	Q	I	D	L	V	E	A	H	K	I	N	D	R	E	Q	K	L	H	A	L	K	E	V	L	K	K	F	P	K	E	N	H	E	V	F	K	Y	V	I	S	H	L	N	K	V	S	H	N	N	K	V	N	L	M	T	S	E	N	L	S	I	C	F	W
Template Known Secondary structure								S	S	S		S	S												T	T			S														T	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		1322	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	L	M	R	P	Q	E	E	T	V	A	A	L	M	D	L	K	F	Q	N	I	V	V	E	I	L	I	E	N	H	E	K	I	F
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		P	T	L	M	R	P	D	M	D	.	.	.	A	L	T	A	T	R	T	Y	Q	T	I	I	E	L	F	I	Q	Q	C	P	F	F	F
Template Known Secondary structure											.	.	.																		T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		1402	.	.	.	.	.	.	.	1410				.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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