Job Description A1A4S6 Confidence 99.59% Date Wed May 9 18:01:49 BST 2012 Rank 37 Aligned Residues 154 % Identity 16% Template c3a8qB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:t-lymphoma invasion and metastasis-inducing PDBTitle: low-resolution crystal structure of the tiam2 phccex domain Resolution 3.20 Å

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		266	.	.	.	270	.	.	.	.	.									.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																																																									.
Query SS confidence												.	.	.	.	.	.	.	.																																																									.
Query Sequence		F	T	A	E	G	Y	L	Y	V	Q	.	.	.	.	.	.	.	.	E	K	R	P	A	P	F	G	S	S	W	V	K	H	Y	C	M	Y	R	K	A	A	K	K	F	N	M	I	P	F	E	H	R	S	G	G	K	L	G	D	G	E	V	F	F	L	K	E	C	T	K	R	H	T	D	S	.	I	D	R	R	F
Query Conservation												.	.	.	.	.	.	.	.																																																									.
Alig confidence												.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.																								.
Template Conservation																																													.	.	.	.	.	.	.	.
Template Sequence		V	R	K	A	G	W	L	F	F	K	P	L	V	T	L	Q	K	E	R	K	L	E	L	V	A	R	R	K	W	K	Q	Y	W	V	T	L	K	G	C	T	L	L	F	.	.	.	.	.	.	.	.	Y	E	T	Y	S	A	P	R	C	A	L	F	A	E	D	S	I	V	Q	S	V	P	E	H	P	K	K	E	H
Template Known Secondary structure														B				T	T	T																			T	T					.	.	.	.	.	.	.	.		S						S						T	T							T	T		S	S		S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Template SS confidence
		505	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.									.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	F	D	I	E	A	A	D	R	P	G	V	S	L	T	M	Q	A	F	S	E	E	E	R	K	Q	W	L	E	A	L	G	G	K	E	A	L	S	H	S	F	N	T	A	I	I	P	R	P	E	G	N	A	Q	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.
Template Sequence		V	F	C	L	S	N	S	C	G	.	.	D	V	Y	L	F	Q	A	T	S	Q	T	D	L	E	N	W	V	T	A	I	H	S	A	C	A	S	L	F	A	K	K	H	G	K	E	D	T	V	R	L	L	K	S	Q	T	R	S	L	L	Q	K	I	D	M	D	S	K	M	K	K	M	A	E	L	Q	L	S	V	V
Template Known Secondary structure								T	T	T	.	.								S	S																							T	T		S																																T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		585	.	.	.	.	590	.	.	.			.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
																																											393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	G	F	T	I	I	R	K	C	I	S	A	V	E	T	R	G	I	N	D	Q	G	L	Y	R	V	V	G	V	S	S	K	V	Q	R	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	P	K	N	R	K	A	I	E	N	Q	I	R	Q	W	E	Q	N	L	E	K	F	H	M	D	L	F	R	M	R	C	Y	L	A	S	L	Q	G	G	E	L	P	N	P	K	S	L	L	A	A	T	S	R	P	S	K	L	A	L	G	R	L	G	V	L	S	V	S	S	F	H	A	L	V	C	S	R
Template Known Secondary structure																																																			T	T									T	T	S	S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions