 |
| Job Description | A1A4S6 | | Confidence | 98.86% | Date | Wed May 9 18:01:49 BST 2012 |
| Rank | 259 | Aligned Residues | 106 |
| % Identity | 20% | Template | c2yryA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:pleckstrin homology domain-containing family a |
PDBTitle: solution structure of the ph domain of pleckstrin homology2 domain-containing family a member 6 from human
|
| Resolution | UNK |
|
 |
|   |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | |
|
|
. | . | . | . | 330 |
| Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
| Query Sequence |   |
R | Q | N | P | K | D | H | K | R | A | S | Q | F | T | A | E | G | Y | L | Y | V | Q | E | K | R | P | A | P | F | G | S | S | W | V | K | H | Y | C | M | Y | R | K | A | A | K | K | F | N | M | I | P | F | E | H | R | S | G | G | K | L | G | D | G | E | V | F | F | L | K | E | C | T | . |
. |
. |
K | R | H | T | D |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   | . | . | . |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   | . | . | . |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
R | S | H | S | M | K | R | N | P | N | A | P | V | T | K | A | G | W | L | F | . |
. |
. |
K | Q | A | S | S | G | V | K | Q | W | N | K | R | W | F | V | L | V | D | R | C | L | F | Y | Y | . |
. |
. |
. |
. |
. |
K | D | E | K | E | E | S | I | L | G | S | I | P | L | L | S | F | R | V | A | A | V | Q | P | S | D |
| Template Known Secondary structure |   |
|
|
|
|
|
|
|
| T | T |
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |
|
| S | S | S |
|
|  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | . | . | . | . | . | . | S | S | T | T |
|
| S |
|
|  |  |  |  | S | T | T |
|
|
|  |  |
|
| T | T |
|
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  | . | . | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
|   |
|   |   |
331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | I | D | R | R | F | C | F | D | I | E | A | A | D | R | P | G | V | S | L | T | M | Q | A | F | S | E | E | E | R | K | Q | W | L | E | A | L | G | G | K |
| Query Conservation |   |
  |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |
|
|   |   |
|   |   |
|
| Template Sequence |   |
N | I | S | R | K | H | T | F | K | A | E | H | A | G | V | . |
. |
R | T | Y | F | F | S | A | E | S | P | E | E | Q | E | A | W | I | Q | A | M | G | E | A |
| Template Known Secondary structure |   |
S |
| S | S | S | S |  |  |  |  |  |
| S | S | S | . | . |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | |
|
. | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|