Job Description A1A4S6 Confidence 99.95% Date Wed May 9 18:01:49 BST 2012 Rank 20 Aligned Residues 162 % Identity 17% Template c2qv2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:inositol polyphosphate 5-phosphatase ocrl-1; PDBTitle: a role of the lowe syndrome protein ocrl in early steps of2 the endocytic pathway Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	T	I	I	R	K	C	I	S	A	V	E	T	R	G	I	N	D	Q	G	L	Y	R	V	V	G	V	S	S	K	V	Q	R	L	L	S	M	L	M	D	V	K	T	C	N	E	V	D	L	E	N	S	A	D	W	E	V	K	T	I	T	S	A	L	K	Q	Y	L	R	S	L	P	E	P	L	M	T	Y	E
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		V	P	K	E	I	W	L	L	V	D	H	L	F	K	Y	A	C	H	Q	E	D	L	F	Q	T	P	G	M	Q	E	E	L	Q	Q	I	I	D	C	L	D	T	S	I	.	.	.	.	.	.	.	P	E	T	I	P	G	S	N	H	S	V	A	E	A	L	L	I	F	L	E	A	L	P	E	P	V	I	C	Y	E
Template Known Secondary structure		S																T	T		T	T	T	T	T	S																			.	.	.	.	.	.	.		S	S			S																	S	S		S	B		G	G
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.								.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		L	H	G	D	F	I	V	P	A	K	S	G	S	P	E	S	R	V	N	A	I	H	F	L	V	H	K	L	P	E	K	N	K	E	M	L	D	I	L	V	K	H	L	T	N	V	S	N	H	S	K	Q	N	L	M	T	V	A	N	L	G	V	V	F	G	P	T	L	M	R	P	Q	E	E	T	V	A	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence												.	.	.	.	.	.																																																														.	.	.
Template Conservation												.	.	.	.	.	.
Template Sequence		L	Y	Q	R	C	L	D	S	A	Y	.	.	.	.	.	.	D	P	R	I	C	R	Q	V	I	S	Q	L	P	R	C	H	R	N	V	F	R	Y	L	M	A	F	L	R	E	L	L	K	F	S	E	Y	N	S	V	N	A	N	M	I	A	T	L	F	T	S	L	L	L	R	P	P	P	N	L	M	A	R	Q	T
Template Known Secondary structure		G								T	T	.	.	.	.	.	.											T	S																				T	T																				B				G	G	G	T
Template Predicted Secondary structure												.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.							.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		552	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	M	D	L	K	F	Q	N	I	V	V	E	I	L	I	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	S	D	R	Q	R	A	I	Q	F	L	L	G	F	L	L	G	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions