Job Description A1A4S6 Confidence 99.98% Date Wed May 9 18:01:49 BST 2012 Rank 7 Aligned Residues 190 % Identity 33% Template c2ovjA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rac gtpase-activating protein 1; PDBTitle: the crystal structure of the human rac gtpase activating protein 12 (racgap1) mgcracgap. Resolution 1.49 Å

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		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	R	P	E	G	N	A	Q	L	D	K	M	G	F	T	I	I	R	K	C	I	S	A	V	E	T	R	G	I	N	D	Q	G	L	Y	R	V	V	G	V	S	S	K	V	Q	R	L	L	S	M	L	M	D	V	K	T	C	N	E	V	D	L	E	N	S	A	D	W	E	V	K	T	I	T	S	A	L	K	Q
Query Conservation
Alig confidence																																																													.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		G	M	L	A	D	F	V	S	Q	T	S	P	M	I	P	S	I	V	V	H	C	V	N	E	I	E	Q	R	G	L	T	E	T	G	L	Y	R	I	S	G	C	D	R	T	V	K	E	L	K	E	K	F	L	R	V	K	T	V	P	.	.	.	.	L	L	S	K	V	D	D	I	H	A	I	C	S	L	L	K	D
Template Known Secondary structure				G	G	G	G			S	S	S	S																	T	T	T	S	T	T	T	T	T	S																T	T		S			.	.	.	.		G	G	G
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.					.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	R	S	L	P	E	P	L	M	T	Y	E	L	H	G	D	F	I	V	P	A	K	S	G	S	P	E	S	R	V	N	A	I	H	F	L	V	H	K	L	P	E	K	N	K	E	M	L	D	I	L	V	K	H	L	T	N	V	S	N	H	S	K	Q	N	L	M	T	V	A	N	L	G	V	V	F	G	P	T
Query Conservation
Alig confidence																																																															.
Template Conservation																																																															.
Template Sequence		F	L	R	N	L	K	E	P	L	L	T	F	R	L	N	R	A	F	M	E	A	A	E	I	T	D	E	D	N	S	I	A	A	M	Y	Q	A	V	G	E	L	P	Q	A	N	R	D	T	L	A	F	L	M	I	H	L	Q	R	V	A	Q	.	S	P	H	T	K	M	D	V	A	N	L	A	K	V	F	G	P	T
Template Known Secondary structure					T	S	S	S		T	T		T	T	T											S	S														T	S																					.		T	T	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.		.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
		542	.	.	.	.	.	.	.				550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		L	M	R	P	Q	E	E	T	.	.	.	V	A	A	L	M	D	L	K	F	Q	N	I	V	V	E	I	L	I	E	N	H	E	K	I	F	R	T
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		I	V	A	H	A	V	P	N	P	D	P	V	T	M	L	Q	D	I	K	R	Q	P	K	V	V	E	R	L	L	S	L	P	L	E	Y	W	S	Q
Template Known Secondary structure			T			S	S	S	S																							S							G
Template Predicted Secondary structure
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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