Job Description A1A4S6 Confidence 99.57% Date Wed May 9 18:01:49 BST 2012 Rank 41 Aligned Residues 188 % Identity 15% Template c2ficA_ PDB info PDB header:endocytosis/exocytosis, membrane protein Chain: A: PDB Molecule:bridging integrator 1; PDBTitle: the crystal structure of the bar domain from human bin1/amphiphysin ii2 and its implications for molecular recognition Resolution 1.99 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	H	E	A	E	L	E	R	T	N	K	F	I	K	E	L	I	K	D	G	K	N	L	I	A	A	T	K	S	L	S	V	A	Q	R	K	F	A	H	S	L	R	D	F	K	F	E	F	I	G	D	A	V	T	D	D	E	R	C	I	D	A	S	L	R	E	F	S	N	F	L	K	N	L	E	E	Q	R	E
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	C	V	Q	N	F	N	K	Q	L	T	E	G	T	R	L	Q	K	D	L	R	T	Y	L	A	S	V	K	A	M	H	E	A	S	K	K	L	N	E	C	L	Q	E	V	Y	.	.	.	.	.	.	.	.	.	E	P	D	W	P	G	R	D	E	A	N	K	I	A	E	N	N	D	L	L	W	M	D	Y	H
Template Known Secondary structure																																																.	.	.	.	.	.	.	.	.		T	T	S	T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	A	L	S	V	T	E	T	L	I	K	P	L	E	K	F	R	K	E	Q	L	G	A	V	K	E	E	K	K	K	F	D	K	E	T	E	K	N	Y	S	L	I	D	K	H	L	N	L	S	A	K	K	K	D	S	H	L	Q	E	A	D	I	Q	V	E	Q	N	R	Q	H	F	Y	E	L	S	L	E	Y	V
Query Conservation
Alig confidence					.	.	.													.																																		.	.	.	.	.
Template Conservation					.	.	.													.																																		.	.	.	.	.
Template Sequence		Q	K	L	.	.	.	V	D	Q	A	L	L	T	M	D	T	Y	L	.	G	Q	F	P	D	I	K	S	R	I	A	K	R	G	R	K	L	V	D	Y	D	S	A	R	H	H	Y	E	S	L	Q	T	K	.	.	.	.	.	I	A	K	A	E	E	E	L	I	K	A	Q	K	V	F	E	E	M	N	V	D	L	Q
Template Known Secondary structure					.	.	.				T									.		T																																.	.	.	.	.
Template Predicted Secondary structure					.	.	.													.																																		.	.	.	.	.
Template SS confidence
		126	.	.				.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	K	L	Q	E	I	Q	E	R	K	K	F	E	F	V	E	P	M	L	S	F	F	Q	G	M	F	T	F	Y	H	Q	G	H	E	L	A	K	D	F	N	H	Y	K	M	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	L	P	S	L	W	N	S	R	V	G	F	Y	V	N	T	F	Q	S	I	A	G	L	E	E	N	F	H	K	E	M	S	K	L	N	Q	N	L	N	D	V	L	V	G	L
Template Known Secondary structure																																														T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions