 |
| Job Description | A1A4S6 | | Confidence | 70.28% | Date | Wed May 9 18:01:49 BST 2012 |
| Rank | 391 | Aligned Residues | 28 |
| % Identity | 14% | Template | c2d9lA_ |
| PDB info |
PDB header:gene regulation | Chain: A: PDB Molecule:nucleoporin-like protein rip; |
PDBTitle: solution structure of the arfgap domain of human rip
|
| Resolution | UNK |
|
|   |   |
402 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
C | I | S | A | V | E | T | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | I | N | D | Q | G | L | Y | R | V | V | G | V | S | S | K | V | Q | R | L |
| Query Conservation |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |
|
|   |
|   |   |
|   |   |   |   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|   |   |   |
|   |
|
|
|   |   |   |
|
|
|
|
|   |   |
|
|
|
|
|
|   |
|
|   |   |
|   |
|
|
|
|
| Template Sequence |   |
C | F | D | C | D | Q | R | G | P | T | Y | V | N | M | T | V | G | S | F | V | C | T | S | C | S | G | S | L | R | G | L | N | P | P | H | R | V | K | S | I |
| Template Known Secondary structure |   |
| S | S | S |
|
| B | S |
|
|  |  |  | T | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  | S | S | S |
|
|
|  |  |  | S |
| Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|