Job Description A1A4S6 Confidence 97.13% Date Wed May 9 18:01:49 BST 2012 Rank 345 Aligned Residues 181 % Identity 19% Template c2b0oF_ PDB info PDB header:metal binding protein Chain: F: PDB Molecule:uplc1; PDBTitle: crystal structure of uplc1 gap domain Resolution 2.06 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		391	.	.	.	.	.	.	.	.	400	.							.	.	.	.	.	.	.	.													410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430																	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	K	M	G	F	T	I	I	R	K	.	.	.	.	.	.	C	I	S	A	V	E	T	R	.	.	.	.	.	.	.	.	.	.	.	.	G	I	N	D	Q	G	L	Y	R	V	V	G	V	S	.	S	K	V	Q	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	L	M	D
Query Conservation													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	K	L	L	I	A	E	V	K	S	R	P	G	N	S	Q	C	C	D	C	G	A	A	D	P	T	W	L	S	T	N	L	G	V	L	T	C	I	Q	C	S	G	V	H	R	E	L	G	V	R	F	S	R	M	Q	S	L	T	L	D	L	L	G	P	S	E	L	L	L	A	L	N	M	G	N	T	S	F	N
Template Known Secondary structure													S	T	T	T	T	B		T	T	T			B	S						T	T	T	T																T	T	T						T	T	T	S				G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.			.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.																		.	.	.
Predicted Secondary structure																																.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	T	C	N	E	V	D	L	E	N	S	A	D	W	E	V	K	T	I	T	S	A	L	K	Q	Y	L	R	S	.	.	L	P	E	P	L	M	T	Y	E	L	H	G	D	F	I	V	P	A	K	S	G	S	P	E	S	R	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	H
Query Conservation																																.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	M	E	A	Q	L	P	S	H	G	G	P	K	P	S	A	E	S	D	M	G	T	R	R	D	Y	I	M	A	K	Y	V	E	H	R	F	A	R	R	C	T	P	Q	R	L	W	T	A	I	C	N	R	D	L	L	S	V	L	E	A	F	A	N	G	Q	D	F	G	Q	P	L	P	G	E	E	L	V	L	H
Template Known Secondary structure					T	T	T	S		T	T		T	T				T	T															T	S		T	T	S															T											T	T			T	T	S		B				B
Template Predicted Secondary structure
Template SS confidence
		504	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.																	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	V	H	K	L	P	E	K	N	K	E	M	L	D	I	L	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	T	N	V	S	N	H	S	K	Q	N	L	M	T	V	A	N	L	G	V	V	F	G	P	T	L	M	R	P	Q	E	E	T	V	A	A	L	M	D	L	K	F	Q	N
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																																											.	.	.
Template Sequence		L	A	V	K	V	A	N	Q	A	S	L	P	L	V	D	F	I	I	Q	N	G	G	H	L	D	A	K	A	A	D	G	N	T	A	L	H	Y	A	A	L	Y	N	Q	P	D	C	L	K	L	L	L	K	G	R	A	L	V	.	.	.	G	T	V	N	E	A	G	E	T	A	L	D	I	A	R	K	K	H	H	K
Template Known Secondary structure						T			G	G	G												S		T	T				T	T											T	T											T	T				.	.	.	S				T	T	S											T
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.				.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.
		561	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	V	E	I	L	I	E	N	H	E	K	I	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	C	E	E	L	L	E	Q	A	Q	A	G	T	F
Template Known Secondary structure												T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		669	670	.	.	.	.	.	.	.	.	.	680	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions