Job Description A1A4S6 Confidence 98.01% Date Wed May 9 18:01:49 BST 2012 Rank 318 Aligned Residues 315 % Identity 10% Template c1xcgA_ PDB info PDB header:signaling protein activator/signaling pr Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 11; PDBTitle: crystal structure of human rhoa in complex with dh/ph2 fragment of pdzrhogef Resolution 2.50 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	E	L	I	K	D	G	K	N	L	I	A	A	T	K	S	L	S	V	A	Q	R	K	F	A	H	S	L	R	D	F	K	F	E	F	I	G	D	A	V	T	D	D	E	R	C	I	D	A	S	L	R	E	F	S	N	F	L	K	N	L	E	E	Q	R	E	I	M	A	L	S	V	T	E	T	L	I	K	P
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		V	A	G	L	T	Q	R	E	I	D	R	Q	E	V	I	N	E	L	F	V	T	E	A	S	H	L	R	T	L	R	V	L	D	L	I	F	Y	Q	R	.	M	K	K	E	N	L	M	P	R	E	E	L	A	R	L	F	P	N	L	P	E	L	I	E	I	H	N	S	W	C	E	A	M	K	K	L	R	E	E	G
Template Known Secondary structure		G	G	G	S																																T				.				T	T	S	S									S	S	S																					T
Template Predicted Secondary structure																																									.
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.		.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	K	F	R	K	E	Q	L	G	A	V	K	E	E	K	K	K	F	D	K	E	T	E	K	N	Y	S	L	I	D	K	H	L	N	L	S	A	K	K	K	D	S	H	L	Q	E	A	D	I	Q	V	E	Q	N	R	Q	H	F	Y	E	L	S	L	E	Y	V	C	K	L	Q	E	I	Q	E	R	K	K	F	E
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	I	K	E	I	S	D	L	M	L	A	R	F	D	G	P	A	R	E	E	L	Q	Q	V	A	A	Q	F	C	S	Y	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	L	E	L	I	K	T	K	Q	R	K	E	S	R	F	Q	L	F	M	Q	E	A	E	S	H	P	Q	C	R	R	L	Q
Template Known Secondary structure		S	S													S																T	T			.	.	.	.	.	.	.	.	.	.	.	.	.																									T	S	G	G	G	T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		804	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.														.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	E	P	M	L	S	F	F	Q	G	M	F	T	F	Y	H	Q	G	H	E	L	A	K	D	F	N	H	.	.	.	.	.	.	Y	K	M	E	L	Q	I	N	I	Q	N	T	R	N	R	F	E	G	T	R	S	E	V	E	E	L	M	N	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	D	L	I	I	S	E	M	Q	R	L	T	K	Y	P	L	L	L	E	S	I	I	K	H	T	E	G	G	T	S	E	H	E	K	L	C	R	A	R	D	Q	C	R	E	I	L	K	Y	V	N	E	A	V	K	Q	T	E	N	R	H	R	L	E	G	Y	Q	K	R	L	D	A	T	A	L	E	R	A	S	N
Template Known Secondary structure						T	T																			T	S		T	T	S																																															S		S
Template Predicted Secondary structure
Template SS confidence
		871	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950
					254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	R	Q	N	P	K	D	H	K	R	A	S	Q	F	T	A	E	G	Y	L	Y	V	Q	E	K	R	P	A	P	F	G	S	S	W	V	K	H	Y	C	M	Y	R	K	A	A	K	K	F	N	M	I	P	F	E	H	R	S	G	G	K	L	G	D	G	E	V	F	F	L	K	E	C	T	K	R	H	T	D
Query Conservation		.	.	.
Alig confidence		.	.	.																												.	.	.	.	.																	.
Template Conservation																																.	.	.	.	.																	.
Template Sequence		P	L	A	A	E	F	K	S	L	D	L	T	T	R	K	M	I	H	E	G	P	L	T	W	R	I	S	K	D	K	.	.	.	.	.	T	L	D	L	H	V	L	L	L	E	D	L	L	V	L	L	.	Q	K	Q	D	E	K	L	L	L	K	C	T	F	S	P	V	L	K	L	N	A	V	L	I	R	S	V	A
Template Known Secondary structure		T	T	T	G	G	G	G	G			G	G	G	S													S	S	S		.	.	.	.	.										S	S						.				S	S										S				G	G	G							S
Template Predicted Secondary structure																																.	.	.	.	.																	.
Template SS confidence
		951	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980						.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.		.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	D	R	R	F	C	F	D	I	E	A	A	D	R	P	G	V	S	L	T	M	Q	A	F	S	E	E	E	R	K	Q	W	L	E	A	L	G	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	K	R	A	F	F	I	I	C	T	S	K	L	G	P	P	Q	I	Y	E	L	V	A	L	T	S	S	D	K	N	T	W	M	E	L	L	E	E	A
Template Known Secondary structure		S		S	S									S	S	S	T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		1038	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions