Job Description A1A4S6 Confidence 100.00% Date Wed May 9 18:01:49 BST 2012 Rank 3 Aligned Residues 193 % Identity 34% Template c1xa6A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:beta2-chimaerin; PDBTitle: crystal structure of the human beta2-chimaerin Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	I	P	R	P	E	G	N	A	Q	L	D	K	M	G	F	T	I	I	R	K	C	I	S	A	V	E	T	R	G	I	N	D	Q	G	L	Y	R	V	V	G	V	S	S	K	V	Q	R	L	L	S	M	L	M	D	V	K	T	C	N	E	V	D	L	E	N	S	A	D	W	E	V	K	T	I	T	S	A	L
Query Conservation
Alig confidence																																																														.	.
Template Conservation																																																														.	.
Template Sequence		Y	C	C	D	L	T	T	L	V	K	A	H	N	T	Q	R	P	M	V	V	D	I	C	I	R	E	I	E	A	R	G	L	K	S	E	G	L	Y	R	V	S	G	F	T	E	H	I	E	D	V	K	M	A	F	D	R	D	G	E	K	.	.	A	D	I	S	A	N	V	Y	P	D	I	N	I	I	T	G	A	L
Template Known Secondary structure		T	T	S										T		S	S														S		S	S	S	T	T	T	T	T	S															S	S	T	T	T	T	.	.	S				S	S	S	S			T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.			.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	Y	L	R	S	L	P	E	P	L	M	T	Y	E	L	H	G	D	F	I	V	P	A	K	S	G	S	P	E	S	R	V	N	A	I	H	F	L	V	H	K	L	P	E	K	N	K	E	M	L	D	I	L	V	K	H	L	T	N	V	S	N	H	S	K	Q	N	L	M	T	V	A	N	L	G	V	V	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	Y	F	R	D	L	P	I	P	V	I	T	Y	D	T	Y	S	K	F	I	D	A	A	K	I	S	N	A	D	E	R	L	E	A	V	H	E	V	L	M	L	L	P	P	A	H	Y	E	T	L	R	Y	L	M	I	H	L	K	K	V	T	M	N	E	K	D	N	F	M	N	A	E	N	L	G	I	V	F	G
Template Known Secondary structure									S	S		T	T		S	T	T						T	T	T	T																T	T	S											T	T	T	T	T					T	T	T	T	T	S												T
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		540	.	.	.	.		.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		P	T	L	M	R	.	P	Q	E	E	T	V	A	A	L	M	D	L	K	F	Q	N	I	V	V	E	I	L	I	E	N	H	E	K	I	F
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		P	T	L	M	R	P	P	E	D	S	T	L	T	T	L	H	D	M	R	Y	Q	K	L	I	V	Q	I	L	I	E	N	E	D	V	L	F
Template Known Secondary structure		T	T	S						S		T	T	G	G	G	G	T														T
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions