Job Description A1A4S6 Confidence 99.54% Date Wed May 9 18:01:49 BST 2012 Rank 43 Aligned Residues 201 % Identity 17% Template c1uruA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:amphiphysin; PDBTitle: amphiphysin bar domain from drosophila Resolution 2.6 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	I	R	A	H	E	A	E	L	E	R	T	N	K	F	I	K	E	L	I	K	D	G	K	N	L	I	A	A	T	K	S	L	S	V	A	Q	R	K	F	A	H	S	L	R	D	F	K	F	E	F	I	G	D	A	V	T	D	D	E	R	C	I	D	A	S	L	R	E	F	S	N	F	L	K	N	L	E	E
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	F	D	D	H	L	N	N	F	N	R	Q	Q	A	S	A	N	R	L	Q	K	E	F	N	N	Y	I	R	C	V	R	A	A	Q	A	A	S	K	T	L	X	D	S	V	C	E	I	Y	E	P	Q	W	S	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	A	L	Q	A	Q	T	G	A	S	E	S
Template Known Secondary structure																																																		S		T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.													.	.	.	.	.	.	.	.	100	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		Q	R	E	I	M	A	L	S	V	T	E	T	L	I	K	P	L	E	K	F	R	K	E	Q	L	G	A	V	K	E	E	K	K	K	F	D	K	E	T	E	K	N	Y	S	L	I	D	K	H	L	N	L	S	A	K	K	.	.	.	.	K	D	S	H	L	Q	E	A	D	I	Q	V	E	Q	N	R	Q	H	F	Y
Query Conservation																																																										.	.	.	.
Alig confidence																								.																																		.	.	.	.
Template Conservation																								.
Template Sequence		L	W	A	D	F	A	H	K	L	G	D	Q	V	L	I	P	L	N	T	Y	T	G	.	Q	F	P	E	X	K	K	K	V	E	K	R	N	R	K	L	I	D	Y	D	G	Q	R	H	S	F	Q	N	L	Q	A	N	A	N	K	R	K	D	D	V	K	L	T	K	G	R	E	Q	L	E	E	A	R	R	T	Y	E
Template Known Secondary structure												T	T	T										.																															T	T	T		B	T	T	B			T	T	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	S	L	E	Y	V	C	K	L	Q	E	I	Q	E	R	K	K	F	E	F	V	E	P	M	L	S	F	F	Q	G	M	F	T	F	Y	H	Q	G	H	E	L	A	K	D	F	N	H	Y	K	M	E	L	Q	I	N	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	N	T	E	L	H	D	E	L	P	A	L	Y	D	S	R	I	L	F	L	V	T	N	L	Q	T	L	F	A	T	E	Q	V	F	H	N	E	T	A	K	I	Y	S	E	L	E	A	I	V	D	K	L	A	T	E	S	Q
Template Known Secondary structure																																																										T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions