Job Description A1A4S6 Confidence 99.86% Date Wed May 9 18:01:49 BST 2012 Rank 23 Aligned Residues 198 % Identity 13% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	S	P	P	N	A	P	P	R	Q	S	K	R	Q	G	Q	R	T	K	R	P	V	A	V	Y	N	L	C	L	E	L	E	D	G	D	N	P	Y	P	S	K	E	D	T	P	T	S	S	L	D	S	L	S	S	P	S	P	V	T	T	A	V	P	G	P	P	G	P	D	K	N	H	L	L	A	D	G	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	S	P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E
Template Known Secondary structure																																				S										S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		669	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	D	W	A	S	T	I	P	G	Q	T	R	S	S	M	V	Q	W	L	N	P	Q	S	P	T	T	T	S	S	N	S	A	V	T	P	L	S	P	G	S	S	P	F	P	F	S	P	P	A	T	V	A	D	K	P	P	E	S	I	R	S	R	K	A	R	A	V	Y	P	C	E	A	E	H	S	S	E	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q
Template Known Secondary structure								S	S																																															S	S			T	T								S	S		B				S	T	T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		749	750	.	.	.	.	.	.	.	.	.					760	.	.	.	.	.	.	.	.	.											770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.											.	.	.	.	.	.	.	.	.	.
Query Sequence		F	E	I	G	A	I	F	E	D	V	Q	.	.	.	.	T	S	R	E	P	G	W	L	E	G	.	.	.	.	.	.	.	.	.	.	T	L	N	G	K	R	G	L	I	P	Q	N	Y	V	K	L	L
Query Conservation													.	.	.	.											.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure		B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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