Job Description A1A4S6 Confidence 99.70% Date Wed May 9 18:01:49 BST 2012 Rank 28 Aligned Residues 191 % Identity 14% Template c1i49A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:arfaptin 2; PDBTitle: crystal structure analysis of arfaptin Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	I	R	A	H	E	A	E	L	E	R	T	N	K	F	I	K	E	L	I	K	D	G	K	N	L	I	A	A	T	K	S	L	S	V	A	Q	R	K	F	A	H	S	L	R	D	F	K	F	E	F	I	G	D	A	V	T	D	D	E	R	C	I	D	A	S	L	R	E	F	S	N	F	L	K	N	L	E	E
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		L	E	L	E	L	Q	I	E	L	L	R	E	T	K	R	K	Y	E	S	V	L	Q	L	G	R	A	L	T	A	H	L	Y	S	L	L	Q	T	Q	H	A	L	G	D	A	F	A	D	L	S	.	.	.	.	.	.	.	.	.	Q	K	S	P	E	L	Q	E	E	F	G	Y	N	A	E	T	Q	K	L	L	C	K
Template Known Secondary structure																																																			.	.	.	.	.	.	.	.	.				T	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.										.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.					.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		Q	R	E	I	M	A	L	S	V	T	E	T	L	I	K	P	L	E	K	F	R	K	E	Q	L	G	A	V	K	E	E	K	K	K	F	D	K	E	T	E	K	N	Y	S	L	I	D	K	H	L	N	L	S	A	K	K	K	.	.	.	.	D	S	H	L	Q	E	A	D	I	Q	V	E	Q	N	R	Q	H	F	Y
Query Conservation																																																											.	.	.	.
Alig confidence													.																																														.	.	.	.
Template Conservation													.
Template Sequence		N	G	E	T	L	L	G	A	V	N	F	.	F	V	S	S	I	N	T	L	V	T	K	T	M	E	D	T	L	M	T	V	K	Q	Y	E	A	A	R	L	E	Y	D	A	Y	R	T	D	L	E	E	L	S	L	G	P	R	D	A	G	T	R	G	R	L	E	S	A	Q	A	T	F	Q	A	H	R	D	K	Y	E
Template Known Secondary structure													.											T																														T	T	S		S	S	T	T
Template Predicted Secondary structure													.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	S	L	E	Y	V	C	K	L	Q	E	I	Q	E	R	K	K	F	E	F	V	E	P	M	L	S	F	F	Q	G	M	F	T	F	Y	H	Q	G	H	E	L	A	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	R	G	D	V	A	I	K	L	K	F	L	E	E	N	K	I	K	V	M	H	K	Q	L	L	L	F	H	N	A	V	S	A	Y	F	A	G	N	Q	K	Q	L	E	Q
Template Known Secondary structure																																													T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions