Job Description A1A4S6 Confidence 97.58% Date Wed May 9 18:01:49 BST 2012 Rank 332 Aligned Residues 190 % Identity 21% Template c1dcqA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:pyk2-associated protein beta; PDBTitle: crystal structure of the arf-gap domain and ankyrin repeats2 of papbeta. Resolution 2.10 Å

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		391	.	.	.	.	.	.	.	.	400	.							.	.	.	.	.	.	.	.													410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430																	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	K	M	G	F	T	I	I	R	K	.	.	.	.	.	.	C	I	S	A	V	E	T	R	.	.	.	.	.	.	.	.	.	.	.	.	G	I	N	D	Q	G	L	Y	R	V	V	G	V	S	.	S	K	V	Q	R	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	M	L	M	D
Query Conservation													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.															.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	K	E	I	I	S	E	V	Q	R	M	T	G	N	D	V	C	C	D	C	G	A	P	D	P	T	W	L	S	T	N	L	G	I	L	T	C	I	E	C	S	G	I	H	R	E	L	G	V	H	Y	S	R	M	Q	S	L	T	L	D	V	L	G	T	S	E	L	L	L	A	K	N	I	G	N	A	G	F	N
Template Known Secondary structure													S	T	T	T	T	B		T	T	T			B	S						T	T	T	T																T	T	T						T	T	T	S				G	G	G	G						S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.									.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	K	T	C	N	E	V	D	L	E	N	S	A	D	W	E	V	K	T	I	T	S	A	L	K	Q	Y	L	R	S	.	.	.	.	.	.	.	.	L	P	E	P	L	M	T	Y	E	L	H	G	D	F	I	V	P	A	K	S	G	S	P	E	S	R	V	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	M	E	C	C	L	P	S	E	D	P	V	K	P	N	P	G	S	D	M	I	A	R	K	D	Y	I	T	A	K	Y	M	E	R	R	Y	A	R	K	K	H	A	D	T	A	A	K	L	H	S	L	C	E	A	V	K	T	R	D	I	F	G	L	L	Q	A	Y	A	D	G	V	D	L	T	E	K	I	P	L
Template Known Secondary structure					T	T	T			S	S	S			S			T	T															T	T		T	T	S				S	S	S														T	T											T	T			T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
												495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.																	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	I	H	F	L	V	H	K	L	P	E	K	N	K	E	M	L	D	I	L	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	T	N	V	S	N	H	S	K	Q	N	L	M	T	V	A	N	L	G	V	V	F	G	P	T	L	M	R	P	Q	E	E
Query Conservation		.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		A	N	G	H	E	P	D	E	T	A	L	H	L	A	V	R	S	V	D	R	T	S	L	H	I	V	D	F	L	V	Q	N	S	G	N	L	D	K	Q	T	G	K	G	S	T	A	L	H	Y	C	C	L	T	D	N	A	E	C	L	K	L	L	L	R	G	K	A	S	I	.	.	.	E	I	A	N	E	S	G	E
Template Known Secondary structure		S	S		S	S	T	T		B											T	T	T												S		T	T				T	T											T	T											T	T			T	.	.	.	T				T	T	S
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.				.	.	.	.	480	.	.	.
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	A	L	M	D	L	K	F	Q	N	I	V	V	E	I	L	I	E	N	H	E	K	I	F	R	T	P	P	D	T	T	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	L	D	I	A	K	R	L	K	H	E	H	C	E	E	L	L	T	Q	A	L	S	G	R	F	N	S	H	V	H	V	E	Y	E
Template Known Secondary structure										T	T													T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions