Phyre 2 alignment of A1A4S6 with c1yqmA_

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Job Description | A1A4S6
Confidence | 21.30% | Date | Wed May 9 18:01:49 BST 2012
Rank | 431 | Aligned Residues | 31
% Identity | 19% | Template | c1yqmA_
PDB info | PDB header:hydrolase/dna | Chain: A: PDB Molecule:n-glycosylase/dna lyase; | PDBTitle: catalytically inactive human 8-oxoguanine glycosylase2 crosslinked to 7-deazaguanine containing dna
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 746 | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | L | S | F | E | I | G | A | I | F | E | D | V | Q | T | S | R | E | P | G | W | L | E | G | T | L | N | G | K | R | G | L | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | L | V | L | P | S | G | Q | S | F | R | . | W | . | R | E | Q | S | P | A | H | W | S | G | V | L | A | D | Q | V | W | T | L
Template Known Secondary structure |  |  |  |  | T | T | T | T | S |  | S |  | . |  | . |  |  |  |  | T | T |  |  |  |  |  |  | T | T |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 36 | . | . | . | 40 | . | . | . | . | . | . |  | . |  | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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