Phyre 2 alignment of A1A4S6 with c2vgeA_

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Job Description | A1A4S6
Confidence | 69.97% | Date | Wed May 9 18:01:49 BST 2012
Rank | 392 | Aligned Residues | 50
% Identity | 36% | Template | c2vgeA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:rela-associated inhibitor; | PDBTitle: crystal structure of the c-terminal region of human iaspp
Resolution | 2.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 735 | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . |  |  |  | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | V | Y | P | C | E | A | E | H | S | S | E | L | S | F | E | I | G | A | I | F | E | D | V | Q | T | S | R | E | P | G | . | . | . | W | L | E | G | T | L | N | G | K | R | G | L | I | P | Q | N | Y | V | K | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | L | W | D | Y | S | A | E | F | G | D | E | L | S | F | R | E | G | E | S | V | . | T | V | L | R | R | D | G | P | E | E | T | D | W | W | W | A | A | L | H | G | Q | E | G | Y | V | P | R | N | Y | F | G | L
Template Known Secondary structure |  |  | S | S |  | B |  |  | S | S | T | T | B |  |  | B |  | T | T |  |  |  | . |  |  |  |  | S | S |  | T | T |  | S | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G |  |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 765 | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . |  | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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