Phyre 2 alignment of A1A4S6 with c3lh5A_

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Job Description | A1A4S6
Confidence | 94.48% | Date | Wed May 9 18:01:49 BST 2012
Rank | 368 | Aligned Residues | 29
% Identity | 24% | Template | c3lh5A_
PDB info | PDB header:protein binding | Chain: A: PDB Molecule:tight junction protein zo-1; | PDBTitle: crystal structure of the sh3-guanylate kinase core domain of zo-1
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 755 | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | 780 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | E | D | V | Q | T | S | R | E | P | G | W | L | E | G | T | L | N | G | . | . | . | . | . | . | K | R | G | L | I | P | Q | N | Y | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | V | D | T | L | Y | N | G | K | L | G | S | W | L | A | I | R | I | G | K | N | H | K | E | V | E | R | G | I | I | P | N | K | N | R
Template Known Secondary structure |  |  |  |  |  | T | T | T | T | T | T | S |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 545 | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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