Phyre 2 alignment of A1A4S6 with d2o1ra1

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Job Description | A1A4S6
Confidence | 21.65% | Date | Wed May 9 18:01:49 BST 2012
Rank | 429 | Aligned Residues | 47
% Identity | 17% | Template | d2o1ra1
SCOP info | FAD-binding/transporter-associated domain-like | FAD-binding/transporter-associated domain-like | CorC/HlyC domain-like
Resolution | 1.52

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 412 | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | D | Q | G | L | Y | R | V | V | G | V | S | S | K | V | Q | R | L | L | S | M | L | M | D | V | K | T | C | N | E | V | D | L | E | N | S | A | D | W | E | V | K | T | I | T | S | A | L | K | Q | Y | L | R | S | L | P | E | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | S | D | G | S | X | I | I | D | G | . | S | A | N | L | R | D | L | N | K | X | F | . | . | . | . | . | . | . | . | . | N | W | E | L | D | T | E | . | D | A | R | T | F | N | G | L | I | L | E | H | L | E | E | I | P | D | E
Template Known Secondary structure |  |  | T | T | S |  |  |  |  |  | T | . | T |  | B |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | S | . | S |  | S | B |  |  |  |  |  |  |  |  |  | S | S |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 3 | . | . | . | . | . | . | 10 | . | . |  | . | . | . | . | . | . | . | 20 | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 30 |  | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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