Phyre 2 alignment of A1A4S6 with d1khba1

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Job Description | A1A4S6
Confidence | 29.27% | Date | Wed May 9 18:01:49 BST 2012
Rank | 408 | Aligned Residues | 21
% Identity | 33% | Template | d1khba1
SCOP info | PEP carboxykinase-like | PEP carboxykinase-like | PEP carboxykinase C-terminal domain
Resolution | 1.85

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 748 | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . |  |  | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
Query Sequence |  | S | F | E | I | G | A | I | F | E | D | V | Q | T | S | R | E | P | G | . | . | W | L | E | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  | . | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | I | Q | K | N | T | I | F | T | N | V | . | A | E | T | S | D | G | G | V | Y | W | E | G
Template Known Secondary structure |  |  | T | T | S | S |  |  |  |  | S |  | . |  |  |  | T | T | S |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 350 | . | . | . | . | . | . | . | . | . | 360 |  | . | . | . | . | . | . | . | . | . | 370 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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