Phyre 2 alignment of A1A4S6 with c1m9sA_

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Job Description | A1A4S6
Confidence | 26.99% | Date | Wed May 9 18:01:49 BST 2012
Rank | 413 | Aligned Residues | 33
% Identity | 9% | Template | c1m9sA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:internalin b; | PDBTitle: crystal structure of internalin b (inlb), a listeria2 monocytogenes virulence protein containing sh3-like3 domains.
Resolution | 2.65 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 752 | . | . | . | . | . | . | . | 760 | . | . | . | . | . |  |  | . | . | . | . | 770 | . |  | . | . | . | . | . | . | . | . | 780 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | A | I | F | E | D | V | Q | T | S | R | E | P | G | . | . | W | L | E | G | T | L | . | N | G | K | R | G | L | I | P | Q | N | Y | V | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | Q | K | L | I | V | D | C | Q | A | T | I | E | G | Q | L | W | Y | R | I | R | T | S | S | T | F | I | G | W | T | K | A | A | N | L | R
Template Known Secondary structure |  | T |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  | G | G | G |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 592 | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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