Phyre 2 alignment of A1A4S6 with c2fvuA_

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Job Description | A1A4S6
Confidence | 27.97% | Date | Wed May 9 18:01:49 BST 2012
Rank | 411 | Aligned Residues | 23
% Identity | 22% | Template | c2fvuA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:regulatory protein sir3; | PDBTitle: structure of the yeast sir3 bah domain
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 742 | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | H | S | S | E | L | S | F | E | I | G | A | I | F | E | D | V | Q | T | S | R | E | P | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template Sequence |  | R | I | S | D | G | L | S | F | G | K | G | E | S | V | . | I | F | N | D | N | V | T | E | T
Template Known Secondary structure |  |  | T | T | T |  |  |  |  |  | T | T |  |  |  | . |  |  |  |  | T | T | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . |  | . | . | . | 60 | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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