Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNW5
Confidence62.37%DateFri May 25 09:57:59 BST 2012
Rank31Aligned Residues125
% Identity7%Templatec4a55B_
PDB info PDB header:transferaseChain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; PDBTitle: crystal structure of p110alpha in complex with ish2 of p85alpha and2 the inhibitor pik-108
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1340.........1350.........1360.........1370.........1380.........1390.........1400.. .......1410.......
Predicted Secondary structure  ..
Query SS confidence 






























































. .














Query Sequence  VTVHIDHLVVERSDDGSFHIRDSHMLNTGNDLKENVKSDSVLLTSGKYDLKKQRSVTQATQTS. . PGVPWPSQSANFPEF
Query Conservation           

   
       
       
                       
     
  ..               
Alig confidence 






























































..














Template Conservation       

     
   
         
                                               
     
Template Sequence  HEYNTQFQEKSREYDRLYEEYTRTSQEIQMKRTAIEAFNETIKIFEEQCQTQERYSKEYIEKFKREGNEKEIQRIMHNYD
Template Known Secondary structure  TT

Template Predicted Secondary structure 
Template SS confidence 















































































   450.........460.........470.........480.........490.........500.........510.........520.........
 
   1418.1420.........1430.........1440.........1450.........1460....
Predicted Secondary structure 

Query SS confidence 














































Query Sequence  SFDFTREQLMEENESLKQELAKAKMALAEAHLEKDALLHHIKKMTVE
Query Conservation        


 

 
 
  

 


  
 

  




 


 


 
Alig confidence 














































Template Conservation                 
   
     
       
  
  

  
   
Template Sequence  KLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLRKT
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 














































   530.........540.........550.........560.........570......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions