Return to main results Retrieve Phyre Job Id

Job DescriptionA0JNW5
Confidence55.23%DateFri May 25 09:57:59 BST 2012
Rank38Aligned Residues104
% Identity7%Templatec3ipkA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:agi/ii; PDBTitle: crystal structure of a3vp1 of agi/ii of streptococcus mutans
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1361........1370.........1380.........1390.........1400.........1410.... .....1420.........1430.........
Predicted Secondary structure  .
Query SS confidence 





















































.
























Query Sequence  DSHMLNTGNDLKENVKSDSVLLTSGKYDLKKQRSVTQATQTSPGVPWPSQSANF. PEFSFDFTREQLMEENESLKQELAK
Query Conservation   
       
                       
     
              .         


 

 
 
  

 
Alig confidence 





















































.
























Template Conservation 
  
  
      
                           
                                      
Template Sequence  ADYQAKLTAYQTELARVQKANADAKAAYEAAVAANNAANAALTAENTAIKKRNADAKADYEAKLAKYQADLAKYQKDLAD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 















































































   390.........400.........410.........420.........430.........440.........450.........460.........
 
   1440.........1450.........1460....
Predicted Secondary structure 

Query SS confidence 
























Query Sequence  AKMALAEAHLEKDALLHHIKKMTVE
Query Conservation 

  
 

  




 


 


 
Alig confidence 
























Template Conservation                           
Template Sequence  YPVKLKAYEDEQTSIKAALAELEKH
Template Known Secondary structure  GGG
Template Predicted Secondary structure 
Template SS confidence 
























   470.........480.........490....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions