Job Description A0JNW5 Confidence 21.49% Date Fri May 25 09:57:59 BST 2012 Rank 144 Aligned Residues 75 % Identity 17% Template c1dgsB_ PDB info PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	G	I	S	V	S	V	N	S	I	V	I	R	I	G	A	K	A	F	N	A	S	F	E	L	S	Q	L	R	I	Y	S	V	N	A	H	W	E	H	G	D	L	R	F	T	R	I	Q	D	P	Q	R	G	E	V	L	T	F	K	E	I	N	W	Q	M	I	R	I	E	A	D	A	T	Q	S	S	H	L	E
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																					.	.	.	.	.
Template Sequence		A	D	G	V	V	L	K	L	D	D	L	T	L	W	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	G	Y	T	A	R	A	P	R	F	A	L	A	Y	.	.	.	.	.	.	K	F	P	A	E	E	K	E	T	R	L	L	D	V	V	F	Q	V	G	R	.	.	.	.	.	T	G	R	V	T	P	V
Template Known Secondary structure										S	B	T	T			.	.	.	.	.	.	.	.	.	.	.	.			S		B		S	S	S	B	T	T					.	.	.	.	.	.																				T	.	.	.	.	.	T		B
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																					.	.	.	.	.
Template SS confidence
		2282	.	.	.	.	.	.	.	2290	.	.	.	.	.													.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.							.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.						.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	C	A	P	V	R	L	I	T	N	Q	S	K	I	R	V	T	L
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		G	V	L	E	P	V	F	.	I	E	G	S	E	V	S	R	V	T	L
Template Known Secondary structure									.	S	S	S	S
Template Predicted Secondary structure									.
Template SS confidence
		2339	2340	.	.	.	.	.		.	.	.	.	2350	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions