Job Description A0AV96 Confidence 99.56% Date Fri May 25 09:48:37 BST 2012 Rank 201 Aligned Residues 83 % Identity 18% Template d3begb1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.90

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	Y	V	R	N	L	M	I	E	T	T	E	D	T	I	K	K	S	F	G	Q	F	N	P	G	C	V	E	R	V	K	K	I	R	D	Y	A	F	V	H	F	T	S	R	E	D	A	V	H	A	M	N	N	L	N	G	T	E	L	E	G	S	C	L	E	V	T	L	A	K	P	V	D	K	E	Q	Y	S
Query Conservation
Alig confidence																																			.
Template Conservation																																			.
Template Sequence		N	R	V	V	V	S	G	L	P	P	S	G	S	W	Q	D	L	K	D	H	M	R	E	A	G	D	V	C	Y	A	D	V	Y	.	R	D	G	T	G	V	V	E	F	V	R	K	E	D	M	T	Y	A	V	R	K	L	D	N	T	K	F	R	S	H	E	G	E	T	A	Y	I	R	V	K	V	D	G	S	Y	G
Template Known Secondary structure											S	S			T	T							G	G	G	S									.	T	T	S							S	S												T	T		B				T	T	S				B
Template Predicted Secondary structure																																			.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		326	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	R	S
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions