Job Description A0AV96 Confidence 99.75% Date Fri May 25 09:48:37 BST 2012 Rank 63 Aligned Residues 81 % Identity 28% Template d2up1a2 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.10

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Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	.	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P	G	R	L	L	G	V	C	C
Query Conservation																																									.
Alig confidence																																									.																								.								.
Template Conservation																																																																	.								.
Template Sequence		L	T	V	K	K	I	F	V	G	G	I	K	E	D	T	E	E	H	H	L	R	D	Y	F	E	Q	Y	G	K	I	E	V	I	E	I	M	T	D	R	G	S	G	K	K	R	G	F	A	F	V	T	F	D	D	H	D	S	V	D	K	I	V	I	.	Q	K	Y	H	T	V	N	.	G	H	N	C	E	V	R	K
Template Known Secondary structure					S									T	T											G	G	G	S											T	T	T												S										T	.	S	S					T	.	T
Template Predicted Secondary structure																																																																	.								.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.		.	.	.	.	.	.	.	.
		147	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	S	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions