Job Description A0AV96 Confidence 99.72% Date Fri May 25 09:48:37 BST 2012 Rank 110 Aligned Residues 87 % Identity 18% Template d2u1aa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	G	W	E	G	P	H	P	Q	R	G	C	E	V	F	V	G	K	I	P	R	D	V	Y	E	D	E	L	V	P	V	F	E	A	V	G	R	I	Y	E	L	R	L	M	M	D	F	D	G	K	N	R	G	Y	A	F	V	M	Y	C	H	K	H	E	A	K	R	A	V	R	E	L	N	N	Y	E	I	R	P
Query Conservation
Alig confidence																																																		.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		A	P	A	Q	P	L	S	E	N	P	P	N	H	I	L	F	L	T	N	L	P	E	E	T	N	E	L	M	L	S	M	L	F	N	Q	F	P	G	F	K	E	V	R	L	V	P	G	R	.	.	.	.	H	D	I	A	F	V	E	F	D	N	E	V	Q	A	G	A	A	R	D	A	L	Q	G	F	K	I	T	Q
Template Known Secondary structure					S				S	S		S		S									S	S												T	S	T	T								S	S		.	.	.	.									S	S											T	T	T			G	G	G
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	L	L	G	V	C	C	S	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	A	M	K	I	S	F	A	K	K
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions